DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or24a and Or71a

DIOPT Version :10

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_524078.2 Gene:Or71a / 39641 FlyBaseID:FBgn0036474 Length:378 Species:Drosophila melanogaster


Alignment Length:391 Identity:82/391 - (20%)
Similarity:140/391 - (35%) Gaps:124/391 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 IERVRFLTEQQKSKRKLGYKK----------RFYTLATQLTFL---------------------L 136
            |..|||||...|..|....|:          :.|.|....|||                     |
  Fly     6 IRPVRFLTGVLKWWRLWPRKESVSTPDWTNWQAYALHVPFTFLFVLLLWLEAIKSRDIQHTADVL 70

  Fly   137 LCCGFCTSTS--------YSVRHLIDNILRRTHGKD------------WIYE------------- 168
            |.|  .|:|:        :...|:...||......|            |.:|             
  Fly    71 LIC--LTTTALGGKVINIWKYAHVAQGILSEWSTWDLFELRSKQEVDMWRFEHRRFNRVFMFYCL 133

  Fly   169 -----TPFKMMFP--DLLLRLPLY---------PITYILVHWHGY--------ITVVCFVGADGF 209
                 .||.::.|  |:..|||.:         |:.:    |:.:        |...|.|..|..
  Fly   134 CSAGVIPFIVIQPLFDIPNRLPFWMWTPFDWQQPVLF----WYAFIYQATTIPIACACNVTMDAV 194

  Fly   210 FLGFCLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEEARIVREMEKLVDRHNEVAELTERL--SG 272
            .....|:   |.|||:      :..:.:.|...:.::.|     ||.:    |:..|.:||  ..
  Fly   195 NWYLMLH---LSLCLR------MLGQRLSKLQHDDKDLR-----EKFL----ELIHLHQRLKQQA 241

  Fly   273 VMVEI-----TLAHFVTSSLIIGTSVVDILLFSGL----GIIVYVVYTCAVGVEIFLYCLGGSHI 328
            :.:||     |....:.|||||..::..:.:...|    |....:.|..|:.:::.|..:.|:.:
  Fly   242 LSIEIFISKSTFTQILVSSLIICFTIYSMQMSPVLQDLPGFAAMMQYLVAMIMQVMLPTIYGNAV 306

  Fly   329 MEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQRVLTIKI-PFFSPSLETLTSILRFTGSLIA 392
            :::.:.|..|.::|.|...:.|::::.|:.:....|.:|:|. .||...|...|..:....||:|
  Fly   307 IDSANMLTDSMYNSDWPDMNCRMRRLVLMFMVYLNRPVTLKAGGFFHIGLPLFTKTMNQAYSLLA 371

  Fly   393 L 393
            |
  Fly   372 L 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 78/384 (20%)
Or71aNP_524078.2 7tm_6 68..367 CDD:251636 64/322 (20%)

Return to query results.
Submit another query.