DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or24a and Or47a

DIOPT Version :10

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster


Alignment Length:419 Identity:78/419 - (18%)
Similarity:162/419 - (38%) Gaps:77/419 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YFMVPKFALSLIGF--YPEQKRTVLVKLW-------------SFFNFFILTYGCYAEAYYGIHYI 65
            :..|.|..::|:||  :.|.:     ::|             :.|.|.:...         :|..
  Fly     4 FLQVQKSTIALLGFDLFSENR-----EMWKRPYRAMNVFSIAAIFPFILAAV---------LHNW 54

  Fly    66 PINIATALDALCPVASSILSLVKMVAIWWYQDELRSLIERVRFLTEQQKSKRKLGYKKRFYTLAT 130
            . |:....||:..:..:||.|.|...|.:.:.:.:.||::.|.|...:..:   |.:......|.
  Fly    55 K-NVLLLADAMVALLITILGLFKFSMILYLRRDFKRLIDKFRLLMSNEAEQ---GEEYAEILNAA 115

  Fly   131 QLTFLLLCCGF--CTSTSYSVRHLIDNILRRTHGKDWIY-----ETPFKMMFPDLLLRLPLYPIT 188
            ......:|..|  |...::::..::.  |.|.....|:.     |.||..:||..:..:..|.::
  Fly   116 NKQDQRMCTLFRTCFLLAWALNSVLP--LVRMGLSYWLAGHAEPELPFPCLFPWNIHIIRNYVLS 178

  Fly   189 YILVHWHGYIT---VVCFVGADGFFLGF----CLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEE 246
            :|   |..:.:   |:..|..|..|..|    |.:|.:            .:.:.:.......:|
  Fly   179 FI---WSAFASTGVVLPAVSLDTIFCSFTSNLCAFFKI------------AQYKVVRFKGGSLKE 228

  Fly   247 ARIVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSL---IIGTSVVDILLFSGLGIIVYV 308
            ::..  :.|:...:....::...|:.....|..|.|..|||   ::|  .:..:.|:....:.|.
  Fly   229 SQAT--LNKVFALYQTSLDMCNDLNQCYQPIICAQFFISSLQLCMLG--YLFSITFAQTEGVYYA 289

  Fly   309 VYTCAVGVEIFLYCLGGSHIMEACSNLARSTFSSHWY------GHSVRVQKMTLLMVARAQRVLT 367
            .:...:.::.::||..|.::....::...:.:.|.|:      |.|..:.:..|:.:.||.|...
  Fly   290 SFIATIIIQAYIYCYCGENLKTESASFEWAIYDSPWHESLGAGGASTSICRSLLISMMRAHRGFR 354

  Fly   368 IKIPFFSPSLETLTSILRFTGSLIALAKS 396
            |...||..::|..:||:|...|.|.:.:|
  Fly   355 ITGYFFEANMEAFSSIVRTAMSYITMLRS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 65/342 (19%)
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 65/342 (19%)

Return to query results.
Submit another query.