DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or24a and Or43b

DIOPT Version :10

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:384 Identity:75/384 - (19%)
Similarity:159/384 - (41%) Gaps:62/384 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KLWSFFNFFILTYG-CYAEAYYGIHYIPINIATALDALCPVASSILSLVKMVAIWWYQDELRSLI 103
            |:|..|:|   ||. ......:.|:|: |::|.     .|....:.||...:..|.:..:..:||
  Fly    46 KIWRVFSF---TYNMVILPVSFPINYV-IHLAE-----FPPELLLQSLQLCLNTWCFALKFFTLI 101

  Fly   104 ERVRFL-----------------TEQQKSKRKLGYKKRFYTLATQLTFLLLCCGFCTSTSYSVRH 151
            .....|                 .|::|.:..:....|.|     |||:::...:.|||      
  Fly   102 VYTHRLELANKHFDELDKYCVKPAEKRKVRDMVATITRLY-----LTFVVVYVLYATST------ 155

  Fly   152 LIDNILRRTHGKDWIYETPFKMMFPDL---LLRLPLYPITYILVHWHGYITVVCFVGADGFFLGF 213
            |:|.:|.        :..|:...:|.:   :.|..:|..:::.....||...|. ...|.:.:.:
  Fly   156 LLDGLLH--------HRVPYNTYYPFINWRVDRTQMYIQSFLEYFTVGYAIYVA-TATDSYPVIY 211

  Fly   214 CLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEEARIVREMEKLVDRHNEVAELTERLSGVMVEIT 278
            .......:|.|:|.:..|.:..|    ...::.:.:.:.:...:..|..:....:.:..::....
  Fly   212 VAALRTHILLLKDRIIYLGDPSN----EGSSDPSYMFKSLVDCIKAHRTMLNFCDAIQPIISGTI 272

  Fly   279 LAHFVTSSLIIGTSVVDILLFSG----LGIIVYVVYTCAVGVEIFLYCLGGSHIMEACSNLARST 339
            .|.|:....|:|..:::::||:.    .||::||:   ||.::.|..|...:.|::.|..||.:.
  Fly   273 FAQFIICGSILGIIMINMVLFADQSTRFGIVIYVM---AVLLQTFPLCFYCNAIVDDCKELAHAL 334

  Fly   340 FSSHWYGHSVRVQKMTLLMVARAQRVLTI-KIPFFSPSLETLTSILRFTGSLIALAKSV 397
            |.|.|:....|.|:..:..:.:.|:.:|. .:..|:.:|.|..::.:|..::.|:|..:
  Fly   335 FHSAWWVQDKRYQRTVIQFLQKLQQPMTFTAMNIFNINLATNINVAKFAFTVYAIASGM 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 64/344 (19%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 59/315 (19%)

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