DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or24a and Or2a

DIOPT Version :10

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster


Alignment Length:357 Identity:75/357 - (21%)
Similarity:143/357 - (40%) Gaps:61/357 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NIATALDALCPVASSILSLVKMVAIWWYQ---DELRSLIE----RVRFLTEQQKSKRKLGYKKRF 125
            |:|...:.|....:.|::.:|...::..:   .|:|||:.    |.|.:.:.:    ::...::.
  Fly    66 NMAGLCENLTITITDIVANLKFANVYMVRKQLHEIRSLLRLMDARARLVGDPE----EISALRKE 126

  Fly   126 YTLATQLTFLLLCCGFCTSTSYS-VRHLI----DNILRRTHGKDWIYETPFKMMFPDLLLRLPLY 185
            ..:| |.||......|...|:.| ||.::    :.:.....|.||::.|.               
  Fly   127 VNIA-QGTFRTFASIFVFGTTLSCVRVVVRPDRELLYPAWFGVDWMHSTR--------------- 175

  Fly   186 PITYILVHWHGYITVV------CFVGADGFFLGFCLYFTVLLLCLQDDVCDLLEVENI----EKS 240
              .|:|::.:....::      |  .:|.:...|....|..:..|:      |.|..|    |||
  Fly   176 --NYVLINIYQLFGLIVQAIQNC--ASDSYPPAFLCLLTGHMRALE------LRVRRIGCRTEKS 230

  Fly   241 PS----EAEEARIVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFSG 301
            ..    ||....:.:|:.:.:.....|..|.|.:..|:....:|.||.|:.:..|..:..|..:.
  Fly   231 NKGQTYEAWREEVYQELIECIRDLARVHRLREIIQRVLSVPCMAQFVCSAAVQCTVAMHFLYVAD 295

  Fly   302 ----LGIIVYVVYTCAVGVEIFLYCLGGSHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARA 362
                ..:|:.:|:..||.:|:|:.|..|..:......|..:.:..:|.....:.::..|..:||.
  Fly   296 DHDHTAMIISIVFFSAVTLEVFVICYFGDRMRTQSEALCDAFYDCNWIEQLPKFKRELLFTLART 360

  Fly   363 QRVLTIKI-PFFSPSLETLTSILRFTGSLIAL 393
            ||...|.. .:.:.||||...::|||.|:..|
  Fly   361 QRPSLIYAGNYIALSLETFEQVMRFTYSVFTL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 72/350 (21%)
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 72/350 (21%)

Return to query results.
Submit another query.