DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or24a and Or19b

DIOPT Version :10

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster


Alignment Length:410 Identity:76/410 - (18%)
Similarity:150/410 - (36%) Gaps:87/410 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LIGFYPEQKRTVLVKLWSFFNF-FILTYGCYAEAYYGIHYIPIN-IATALDALCPVASSILSLVK 88
            ::|.:|..|||...:.::.::. :.:|:.......:.::.:..| :.|..::||......|.::|
  Fly    21 IMGIHPPGKRTFWGRHYTAYSMVWNVTFHICIWVSFSVNLLQSNSLETFCESLCVTMPHTLYMLK 85

  Fly    89 MVAIWWYQDE-------LRSLIERVRFLTEQQKSKRKLGYKKRFYTLATQLTFLLLCCGFCTSTS 146
            ::.:...:.|       ||.|.:|:....|:|..  ..|.::..:...|  .|..|.|.......
  Fly    86 LINVRRMRGEMISSHWLLRLLDKRLGCADERQII--MAGIERAEFIFRT--IFRGLACTVVLGII 146

  Fly   147 YSVRHLIDNILRRTHGKDWI----------------YETPFKMMFPDLLLRLPLYPITY-ILVHW 194
            |........::..|    ||                ..|...|....|:|.|..||.|| |||..
  Fly   147 YISASSEPTLMYPT----WIPWNWKDSTSAYLATAMLHTTALMANATLVLNLSSYPGTYLILVSV 207

  Fly   195 H-----------GYITVVCFVGADGFFLGFCLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEEAR 248
            |           ||...:..|......:|:                              ..:.:
  Fly   208 HTKALALRVSKLGYGAPLPAVRMQAILVGY------------------------------IHDHQ 242

  Fly   249 IVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFSGLGIIVYVVYTCA 313
            |:..:.|.::|...:....:..|....:.|:.:|    |:.|.  |.|:.|..:..::.::.|  
  Fly   243 IILRLFKSLERSLSMTCFLQFFSTACAQCTICYF----LLFGN--VGIMRFMNMLFLLVILTT-- 299

  Fly   314 VGVEIFLYCLGGSHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQRVLTIKIPFFSP-SL 377
               |..|.|.......:...:|..:.:|.:|...||..:::.|||:||.|..:.:......| |:
  Fly   300 ---ETLLLCYTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISM 361

  Fly   378 ETLTSILRFTGSLIALAKSV 397
            :|.|.:::...:::.|...:
  Fly   362 KTFTVMIKGAYTMLTLLNEI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 69/356 (19%)
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 68/355 (19%)

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