DRSC/TRiP Functional Genomics Resources

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Protein Alignment capu and FH4

DIOPT Version :10

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_001319073.1 Gene:FH4 / 839028 AraportID:AT1G24150 Length:763 Species:Arabidopsis thaliana


Alignment Length:634 Identity:152/634 - (23%)
Similarity:240/634 - (37%) Gaps:149/634 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   763 GQSST--KVSDNESAKEDGEKPHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPP 825
            |:|||  .|..|::.:      :|....||........||.|.|.||||||||.|:.....||||
plant   204 GRSSTSHSVIHNDNYR------NATTTHPPHVKTDSFEFVKPDPTPPPPPPPPIPVKQSATPPPP 262

  Fly   826 PPPP-PGSGSAPPPPPP----APIEGGGGIPPPPPPMSASPSKTTISPAPLPDPAEGNWFHRTNT 885
            |||. ..:|.:||||||    |.:.......|||.|..:|..:::                    
plant   263 PPPKLKNNGPSPPPPPPLKKTAALSSSASKKPPPAPRGSSSGESS-------------------- 307

  Fly   886 MRKSAVNPPKPMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDEPPAANGADAPPTAPPA 950
                  |....::||:|.::                         :||...:.            
plant   308 ------NGQVKLKPLHWDKV-------------------------NPDSDHSM------------ 329

  Fly   951 TKEIWTEIEETPLDNIDEFTE-LFSRQAIAPVSKPKELKVKRAKS-----IKVLDPERSRNVGII 1009
               :|.:|:........:..| ||...|:...| |.:...|:..|     |.:|||.:|:|..|:
plant   330 ---VWDKIDRGSFSFDGDLMEALFGYVAVGKKS-PDDGGDKKPSSASPAQIFILDPRKSQNTAIV 390

  Fly  1010 WRSLHVPSSEIEHAI-----YHIDTSVVSLEALQHMSNIQATEDELQRIKEAAGGDIPLDHPEQF 1069
            .:||.:...|:..::     :|.||       |:.:|.|..|::|...|.:..|....|...|.|
plant   391 LKSLGMTRDELVESLMEGHDFHPDT-------LERLSRIAPTKEEQSAILQFDGDTKMLADAESF 448

  Fly  1070 LLD-ISLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQLIESEDLKLVFSIILTLGNYM 1133
            |.. :..:..|..|::.::|:|.:...::...:.|:|:.....:|........:...||..||.|
plant   449 LFHLLKAVPCAFTRLNALLFRANYYPEISNHNKNLQTLDLACTELRSRGLFVKLLEAILKSGNRM 513

  Fly  1134 NGGNRQRGQADGFNLDILGKLKDVKSKESHTTLLHFIV--------RTYIAQRR----------- 1179
            |.|. .| .|..|||..|.||.||||.:..||||:|:|        :..:..||           
plant   514 NAGT-ARXDAQAFNLTALLKLSDVKSVDGKTTLLNFVVEEVVRSEGKRCVLNRRTNRSFSRSSSS 577

  Fly  1180 -------KEGVHPLEIRLPIP-------EPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKV 1230
                   ||......:||.:|       |..:|::||.:|::.|......|..:....:|    |
plant   578 SISEVISKEEQEKEYLRLGLPVVGGLSSEFTNVKKAAAVDYDTVAATCLALTSRAKDARR----V 638

  Fly  1231 LAASRPEIME--PFKSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYHFSPKACTLTLAQCT 1293
            ||.|..:..|  .|..||.||::..::.:....:...:..:|...|..:|...      .:....
plant   639 LAQSEGDNKEGVRFVKKMNEFLDSVEEEVKLAKEEEKKVLELVKRTTEYYQAG------AVKGKN 697

  Fly  1294 PDQFFEYWTNFTNDFKDIWKKEITSLLNELMKKSKQAQIESRRNVSTKV 1342
            |...|.    ...||..:..|....:...|.::|.....:.|..|...|
plant   698 PLHLFV----IVRDFLAMVDKVCVEIARNLQRRSSMGSTQQRNAVKFPV 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 104/473 (22%)
FH4NP_001319073.1 FH2 310..713 CDD:396655 103/465 (22%)

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