DRSC/TRiP Functional Genomics Resources

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Protein Alignment capu and Fh5

DIOPT Version :10

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_200276.1 Gene:Fh5 / 835554 AraportID:AT5G54650 Length:900 Species:Arabidopsis thaliana


Alignment Length:743 Identity:139/743 - (18%)
Similarity:226/743 - (30%) Gaps:245/743 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CGRCHSVFHLIELFREHKEHEPDCKRTTSSTLHNCDEA-------QGKVWAFLLWKSAQRQAAGE 90
            |..|...|.|: |.:..:.|..:|.....||...|.:.       ......:..::.||.:|..:
plant   143 CPSCQMPFSLL-LVQSPRWHVSECLDAAGSTEKECPDGVTCSSAIPSHYKRYSHFQLAQSRAVND 206

  Fly    91 E-----RNPG----QNNSWKLYQ---TWVKLEESVRDTWIVAGKTIQSFSKTGAGSLQEMPVKIT 143
            .     ..||    |.....|.|   :|.|:.|::       .|..:|         |..|..::
plant   207 SVFSLLNTPGSSCRQTAKLNLSQSPISWSKISENI-------NKKRRS---------QSSPKTLS 255

  Fly   144 KTILEPPYRTASRQRCANDIKPNTPAGAGGAPVETKNRIVVGAQLPQAMKKPELG--TVVKAGP- 205
            :|   ||             |..:||.:.|:..:|.    :.|.|....|..:|.  |:..:.| 
plant   256 QT---PP-------------KDKSPASSQGSVKQTS----LDAWLSSPSKHEKLSQETLSNSYPE 300

  Fly   206 ----VTTTPGTPTRRS----YATRTHPKSGAFSEEEVEKILAKRFSPIIKMHEYLVKWARMTNDQ 262
                ...||.:|.:.:    |..                    .:||:|...|       :.:|:
plant   301 CADSTAKTPQSPQQAADLGDYGI--------------------SYSPLIFNEE-------LDSDE 338

  Fly   263 NTWEPLTHLHSCQSILEHFEVQLAKQKEQRAATAARALQLQRQEKGG-------AAKPAGASATA 320
               :|:..|.|.:|    ||.:....:::   |.....|.:..::.|       :.:|...||::
plant   339 ---DPIKRLFSSES----FEEEYGGTEDE---TQQNTYQSRCPQENGIIPSLKDSQQPNQLSASS 393

  Fly   321 STTGTVNTATTTTTSTSPGSAAAANQLRPMR-------NSKTSAMDRVKQWTAGNRSPGDSSEDM 378
            :                  |..||||.:...       :..:|....:.||.. .:|..||..:.
plant   394 T------------------SQCAANQQQSDHIPDYANWSECSSPASVIGQWET-FQSQSDSFAEC 439

  Fly   379 A-----SGKRKHEDGDTDGTMDGADGGLDGVVKKVKTEPSTASDTLAKATQGANVKILSGSGSG- 437
            |     |...|.:.|.........:.|        :.|..:.|...|:|::......||....| 
plant   440 APRFGNSTHLKEQRGSLPDCASSVEAG--------RRESCSVSSHRAQASEPEPTPSLSNKDKGL 496

  Fly   438 -TASGIIKTAVNGGTGSVGSAGKDGNAAEVVIIKTHQDGVASGISKKVPLLPTGGVNSNSSTVVT 501
             |.|..|....:....|...|...|       :|....||..|:..|                  
plant   497 LTLSQTIPAMPSKSMQSQSCANTKG-------MKQMDIGVFFGLKPK------------------ 536

  Fly   502 RLSPRGTDVAAKV--KILSKSEVGGGGVHGIFKVKTEQTGSSPQSSPKTAAASGVTATAAGAATT 564
               |:..:..|||  |:.::::|.......  ..:.::.|..|....|...|........|||..
plant   537 ---PKEENPKAKVPPKLQNQNDVALPSERK--PAQRKRKGQGPPLGDKDPLADHTNTEPEGAAGN 596

  Fly   565 TTLA-SRPMTIST----------PI--------STTDS------SGVT----TRFIRRNVDG--- 597
            .... .||...||          |.        .|.|:      .|.|    |.|...:..|   
plant   597 QRRGWKRPRQFSTGEEGKGKKQCPFYKKIPGTGFTVDAFQYGQIEGCTAYFLTHFHSDHYGGLTK 661

  Fly   598 -----------TEQLVKQTIRKAPKLQKPLPVSSRVVGSG----------TPGNVV------RSA 635
                       |..||:..:|...:....||:::..|..|          .||.|:      ...
plant   662 KFRCPIYCSKITGNLVQSKLRVESEFINTLPMNTECVVDGIRVVLLEANHCPGAVLLLFRLPNGT 726

  Fly   636 TMTRT--LGAPSSDQKLNALRRQGVHVM 661
            |:..|  ..|..|.:...||..|.||.:
plant   727 TILHTGDFRADRSMESYPALIGQRVHTL 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697
Fh5NP_200276.1 FH2 435..840 CDD:396655 69/358 (19%)
Blue background indicates that the domain is not in the aligned region.

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