DRSC/TRiP Functional Genomics Resources

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Protein Alignment capu and AFH1

DIOPT Version :10

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_189177.1 Gene:AFH1 / 822136 AraportID:AT3G25500 Length:1051 Species:Arabidopsis thaliana


Alignment Length:1153 Identity:250/1153 - (21%)
Similarity:402/1153 - (34%) Gaps:340/1153 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 LSIANDLQEVEEPDRASILHDTDLLVAPNSPAESSPDEELMALQLGKKLAQVLGSGAGSPLTPGT 327
            ||.::||          :..|..:|..|..|.:|.|.                     ||.:|..
plant    12 LSSSSDL----------VFADRRVLHEPFFPIDSPPP---------------------SPPSPPP 45

  Fly   328 MEPCAAGSGSPLANGELFNVSKAKKVELQNLSSRFTAAVTQTPP----GVTSSTPNESGVTGPAG 388
            :......|.:|.::.:            .|.|..|....:..||    ...|...|.|.:..|  
plant    46 LPKLPFSSTTPPSSSD------------PNASPFFPLYPSSPPPPSPASFASFPANISSLIVP-- 96

  Fly   389 PLGATTSSPSLETQSTVIISFKSSQTPV----------QSQTNSAASENVEDDT------APLPL 437
              .||.|.|:.:....|.||..||...|          :|:.|.  ..|..||:      :...:
plant    97 --HATKSPPNSKKLLIVAISAVSSAALVALLIALLYWRRSKRNQ--DLNFSDDSKTYTTDSSRRV 157

  Fly   438 PPPPPGFGTPTTPLLSSNVLKKVASFTVEKSSAGNNSS---------NPPNLCPTSDETTLLATP 493
            .||||....||.....:...::..:     ||..||||         |...:    ||.:|....
plant   158 YPPPPATAPPTRRNAEARSKQRTTT-----SSTNNNSSEFLYLGTMVNQRGI----DEQSLSNNG 213

  Fly   494 CSS----SLTVATLPPEIAVGAAAGGVAGGAG---------SRRGSSYVPEKLSFAAYEKFEGQM 545
            .||    |..:..|||.:..........|..|         |.|||....|.|:...   ..|| 
plant   214 SSSRKLESPDLQPLPPLMKRSFRLNPDVGSIGEEDEEDEFYSPRGSQSGREPLNRVG---LPGQ- 274

  Fly   546 LIKWLISTMQSNPK-----------SSSGDANQELFNTLALQFCNNLKYVGVLKQISNEHLDCGF 599
                       ||:           ||||...:..|.::                          
plant   275 -----------NPRSVNNDTISCSSSSSGSPGRSTFISI-------------------------- 302

  Fly   600 SPYEMYQWTHTEQPTTSLPLTPGKLDKVAAWPFSSTPSGIRALESASLASLGAGGVAGSLATIAT 664
            ||....:.:..:.|..|.| .|.:|   ..:.|..:|       |.|||||.:|           
plant   303 SPSMSPKRSEPKPPVISTP-EPAEL---TDYRFVRSP-------SLSLASLSSG----------- 345

  Fly   665 ASTASSDNQKTLQQILKK-RLLNCTTLAEVHAVVNELLSSVD-EPPRRPSK-------------- 713
               ..:.::..|.||.:. .:.:.||..|.:...|..|||.. .|.|||:.              
plant   346 ---LKNSDEVGLNQIFRSPTVTSLTTSPENNKKENSPLSSTSTSPERRPNDTPEAYLRSPSHSSA 407

  Fly   714 -----RCVNLT-ELLNA----------SEATVYEYNKTGAEGCVKSFTDAETQTESEDCEGTCKC 762
                 ||...: |:|.|          |:......|..|.:|.:|......:::.|......|..
plant   408 STSPYRCFQKSPEVLPAFMSNLRQGLQSQLLSSPSNSHGGQGFLKQLDALRSRSPSSSSSSVCSS 472

  Fly   763 GQS------------STKVSDNESAKEDGEKPHAVAPPP---PPPPPPLHAFVAPPPPPPPPPPP 812
            .:.            |::.|.:.|:..|.:..|::...|   ...|..|.:.|      ||||||
plant   473 PEKASHKSPVTSPKLSSRNSQSLSSSPDRDFSHSLDVSPRISNISPQILQSRV------PPPPPP 531

  Fly   813 PPPLANYG--------APPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPA 869
            ||||..:|        |.....||     |..||..|..      ||....|:::||.:|     
plant   532 PPPLPLWGRRSQVTTKADTISRPP-----SLTPPSHPFV------IPSENLPVTSSPMET----- 580

  Fly   870 PLPDPAEGNWFHRTNTMRKSAVNPPKP-MRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPD 933
              |:         |....::|...||| ::.|:|.::..|:.                       
plant   581 --PE---------TVCASEAAEETPKPKLKALHWDKVRASSD----------------------- 611

  Fly   934 EPPAANGADAPPTAPPATKEIWTEIEETPLDNIDEFTE-LFSRQAIAPVSKPKELKV-------K 990
                             .:.:|..:..:.....:|..| ||..:::.  :||.:.:.       .
plant   612 -----------------REMVWDHLRSSSFKLDEEMIETLFVAKSLN--NKPNQSQTTPRCVLPS 657

  Fly   991 RAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTSVVSLEALQHMSNIQATEDELQRIKE 1055
            ..:..:||||::::|:.|:.|:|:|...|:..|:...:...:..|.|:.:..:..|::|.:::| 
plant   658 PNQENRVLDPKKAQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLK- 721

  Fly  1056 AAGGDIP--LDHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQLIESED 1118
            |...|.|  |.|.|:||..:..|..|.:|:..:::.|.||..|..|.:..||:....::|..|..
plant   722 AYNDDSPVKLGHAEKFLKAMLDIPFAFKRVDAMLYVANFESEVEYLKKSFETLEAACEELRNSRM 786

  Fly  1119 LKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSKESHTTLLHFIVRTYIAQRRKEG- 1182
            ...:...:|..||.||.|. .||.|..|.||.|.||.|||..:..||||||:|:..|   |.|| 
plant   787 FLKLLEAVLKTGNRMNVGT-NRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEII---RAEGT 847

  Fly  1183 -----------VHPLEIRLPI-----PEPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVL 1231
                       :...::.|.:     .|.::|::||.||.|.:...:..|::.............
plant   848 RLSGNNTQTDDIKCRKLGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQVQS 912

  Fly  1232 AASRPEIMEPFKSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYH 1279
            ..:.....:.|...|:.|::.|::.:.::.........|..|...::|
plant   913 TITEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFH 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 95/420 (23%)
AFH1NP_189177.1 FH2 591..985 CDD:396655 94/417 (23%)

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