DRSC/TRiP Functional Genomics Resources

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Protein Alignment capu and daam-1

DIOPT Version :10

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_503132.3 Gene:daam-1 / 186392 WormBaseID:WBGene00018976 Length:987 Species:Caenorhabditis elegans


Alignment Length:774 Identity:160/774 - (20%)
Similarity:278/774 - (35%) Gaps:220/774 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   658 SLATIATASTASSDNQKT----------LQQILKKRLLNCTTLAEVHAVVNELLSSVDEPPRRPS 712
            |||...|:|..|..::.:          :.:.|..:|.:...|...|:::..|.....:....|.
 Worm   326 SLAGSCTSSDISMSSETSSPIDFESVVGMAEALHIKLNHSQALPHFHSLLQHLFMVPSDDQHVPL 390

  Fly   713 KRCVNL--------------TEL-------LNASEATVYEYNKTGAEGCVKSFTDAETQTESEDC 756
            .|..:|              |::       ::.||......|....|...|   :.|...|..|.
 Worm   391 WRLFDLILQHLTLQTTVNGMTDVNSPLQNHVDMSEILARLQNHCDYERIAK---ELEKAKEDMDL 452

  Fly   757 EGT-----------CKCGQSSTKVS-DNESAKEDGEKPHAVAPPPPPPPPPLHAFVAPPPPPPPP 809
            |.|           ...|::.:::| .:.||..        :|..|.|.|||    .||..||.|
 Worm   453 ERTRIMELENRLADFSDGRAGSRISLASTSASS--------SPSDPCPSPPL----LPPVCPPAP 505

  Fly   810 PPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPAPLPDP 874
            ||||||:                               ||:..||        |..:...|    
 Worm   506 PPPPPPI-------------------------------GGLTSPP--------KDALKNVP---- 527

  Fly   875 AEGNWFHRTNTMRKSAVNPPKPMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDEPPAAN 939
                             .||..|:.|.|.|:               :.|.|..:           
 Worm   528 -----------------EPPGNMKTLNWQRL---------------TLDKTRGT----------- 549

  Fly   940 GADAPPTAPPATKEIWTEIEETPLDNIDEFTELFSRQAIAPVSKPKEL--------KVKRAKSIK 996
                          :|..|::..:....:.|||....|.:...|.::.        :..:..:|.
 Worm   550 --------------VWDGIDDEKIYKQLDLTELSGCFAASSSHKDEDTDTLYGTINRRPQQANIT 600

  Fly   997 VLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTSV-VSLEALQHMSNIQATEDELQRIKEAA--- 1057
            |:||.|.:|..|:...|.:...||:.|:..:|... :..:.::.|.....|::||.:|.|:.   
 Worm   601 VIDPRRYQNCTIMLSKLKLSHKEIKQAMMSMDEKCKLPKDMIEQMLKFMPTKEELTQINESVQKH 665

  Fly  1058 GGDIPLDHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQLIESEDLKLV 1122
            |....|...::::.:||.|....:|:.|:.....|.:.|..|...::.|.:.:....:::..:.:
 Worm   666 GSPTVLALADRYMYEISSIPRFEQRLRCLNIIRSFHDRVEALVPFIQVVLKATSSCQQNKRFRQI 730

  Fly  1123 FSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSK-ESHTTLLHFIVRTYIAQRRKEGVHPL 1186
            .:|||.:|||:|.|.| .|.|.||.:..:.||.|||:. .:...||||:| .:|.::     :| 
 Worm   731 LTIILAIGNYLNFGKR-NGNAYGFEMASINKLADVKNALRNDRNLLHFLV-NFIEKK-----YP- 787

  Fly  1187 EIRLPIPEPADVERAAQMDFEEVQQQIFDLN------KKFLGCKRTTAKVLAASRPEIMEP---- 1241
            ::.....:.|.|..||:....|...:|.:|.      :|.|....:|.||   ..||.:.|    
 Worm   788 DLTKFKKDFATVTEAARFSQSETAAEIRNLEEALLIVRKELNLLESTTKV---ELPEHIPPENDR 849

  Fly  1242 FKSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTNFTN 1306
            |....:.|:|.|......|.:...|.::.|.:..:::.:||..     ....|::||.....|.|
 Worm   850 FALVAKAFIEKATAEYHNLDKMFREMKNKFSDCAKYFCYSPSG-----GVPVPEEFFSVINKFLN 909

  Fly  1307 DFKD----IWKKEITSLLNELMKKSKQAQIESRRNVSTKVEKSGRISLKERMLMRRSKN 1361
            .|.:    :|                 |::|....:  |.:...|..|.::...||.:|
 Worm   910 TFNEYHQQLW-----------------AEVEEEEKI--KRQTIARSFLAKKSTTRRKEN 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 100/453 (22%)
daam-1NP_503132.3 Drf_GBD 39..212 CDD:461886
Drf_FH3 216..412 CDD:461885 14/85 (16%)
FH2 524..973 CDD:214697 109/522 (21%)
Blue background indicates that the domain is not in the aligned region.

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