DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and Fmn1

DIOPT Version :10

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_034360.2 Gene:Fmn1 / 14260 MGIID:101815 Length:1466 Species:Mus musculus


Alignment Length:1534 Identity:392/1534 - (25%)
Similarity:596/1534 - (38%) Gaps:449/1534 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RRGSRVRVLSRLMGQKRIR--------EAF-LHSPKLGSSSEVN---------LQGAGNGSSDWI 89
            ||..|.|.....:.|||.|        .|| :...::.|||.::         |:..||      
Mouse   160 RRSGRRRESPEELRQKRTRRKGRGCQESAFQMGKDQVCSSSSLSFRARPNLRLLEERGN------ 218

  Fly    90 AAETEVEHGQLDCSAE-----PADFHDVVSLDCTDSLEYHN---CSSD---ECCYASNDTLTERQ 143
                .|..|.|..|..     ||:.......|    |.:.|   .|.|   |...:.:.:.||..
Mouse   219 ----LVPRGTLTSSLRRRESCPANILRTPDAD----LAFGNSGRTSEDTDLEGPLSPDSSPTEVG 275

  Fly   144 NRELQQRQRQHHHHHHHIHNAHESH-HHYPYDR--------RSLCTSCSSND--------SLFTD 191
            :.::..:.:..|.......|..||| .|...:|        :||..:||...        ...:.
Mouse   276 DADVGGQLKSSHQQEPPQPNVSESHGKHAGAERWSSRTRKSKSLERTCSKKPVSKVVAKIQEPSA 340

  Fly   192 PVDELIISKH---------------------YLNTAAKE---HNNPKAKRDRPLSEISVTSVDTL 232
            ||..::.:.|                     :|.....|   |::.:.:.::|    .:.|:.:.
Mouse   341 PVKRIVRAHHDGKGRVAYGPETQTEFIPKADFLTLPGGETETHSSGRLEEEQP----GIKSLRSS 401

  Fly   233 SPNTAKAVLE-----------LQKRCRADKL--------ACLSL-TRVTYLSIANDLQEVEEPDR 277
            :|..|....|           |:|...::||        ...|| ||.|:     ...|.....:
Mouse   402 APERASITKEPASTEAAVNKVLRKVIESEKLDEATEGKRLGFSLNTRATH-----TFPETRSQRK 461

  Fly   278 AS--------ILHDTDLLVAPNSPAESSPDEELMALQLGKKLAQVLG-----SGAGSPLTPGTME 329
            |.        :|.|....|.|:|| :...||:....|:...|..|..     |.|...|:| ...
Mouse   462 AGLPQSGHKFLLLDLPHTVGPDSP-QPKCDEKKPTPQVPTALGMVFNNSSPQSSAHKRLSP-VPS 524

  Fly   330 PCAAGSGSPL------------ANGE-LFNVSKAKKVELQNLSSRFTAAVTQTPPGVTSSTPNES 381
            |.:....||.            :.|| :||...::|   .::||.|.:|.|..|...|..|    
Mouse   525 PLSPRCPSPQQHHRILLLPPLPSEGEVVFNEYPSRK---NDVSSGFPSADTLEPSSTTKVT---- 582

  Fly   382 GVTGPAGPLGATTSSPSLETQSTVIISFKSSQTPVQSQTNSAASENVEDDTAPLPLPPPPPGFGT 446
                              ||:.....|.::|||.:.|:..|......|..||| |....|||..:
Mouse   583 ------------------ETKGASPTSLRASQTWLVSEEASEKGLGPEKITAP-PQHQLPPGIAS 628

  Fly   447 PTTPLLSSNVLKKVASFTVEKSSAGNNSSNPPNLCPTSDETTLLATPCSSSLTVATLPPEIAVGA 511
            ...|                              |....|.|....|                  
Mouse   629 EGFP------------------------------CDNFKEQTAKDLP------------------ 645

  Fly   512 AAGGVAGGAGSRRGSSYVP-----EKLSFAAYEKFEGQMLIKWLISTMQSNPKSSSGDANQELFN 571
                      ::.|..:||     ....|..:|:.|                |:|    ..||: 
Mouse   646 ----------NKDGGVWVPGYRAGPPCPFLLHEEKE----------------KTS----RSELY- 679

  Fly   572 TLALQFCNNLKYVGVLKQISNEHLDCGFSPYEMYQWTHTEQPTTSLPLTPGKLDKVAAWPFSSTP 636
                                   ||  .:|        .:.||.....|||:|.  |.||...|.
Mouse   680 -----------------------LD--LNP--------DQSPTEQDDRTPGRLQ--AVWPPPKTK 709

  Fly   637 S-----GIRALESASLASLGAGGVAGSLATIATASTASSDNQKTLQQILKKRLLNCTTLAEVHAV 696
            .     |::..|            |...|.|........:..:|||...:.:..:   :...||:
Mouse   710 DTEEKVGLKYTE------------AEYQAAILHLKREHKEEIETLQAQFELKTFH---IRGEHAL 759

  Fly   697 VN-ELLSSVDEPPRRPSKRCVNLTELLNASEATVYEYNKTGAEGC-VKSFTDAETQTESE----D 755
            |. .|..:::...::..||.....|:.:...:|        .:.| .|:|.:...||:.|    .
Mouse   760 VTARLEEAIENLKQQLGKRREGCEEMRDVCIST--------DDDCSPKAFRNVCIQTDRETFLKP 816

  Fly   756 CEGTCKCGQSS-----------TKVSDNESAKE-----------DGEKPHAVAPPPPPPPPPLHA 798
            |:...|..:||           |::|.::.:|:           .....|.::||.||.||||..
Mouse   817 CDAESKATRSSQIVPKKLTISLTQLSPSKDSKDIHAPFQTREGTSSSSQHKISPPAPPTPPPLPP 881

  Fly   799 FVAPPPPP-PP-----PPPPP-PPLANYGAPPPPPPP-----PPGSGSAPPPPPPAPIEG----- 846
            .:.||||| ||     ||.|| ||:.....|||||||     ||..|..||||||.|:..     
Mouse   882 PLIPPPPPLPPGLGPLPPAPPIPPVCPVSPPPPPPPPPPTPVPPSDGPPPPPPPPPPLPNVLALP 946

  Fly   847 GGGIPPPPPPMSASPSKTTISPAPLPDPAEGNWFHRTNTMRKSAVNPPKPMRPLYWTRIVTSAPP 911
            ..|.||||||    |....::|.|.|..:.|.....:...||.|:.|..||:|||||||      
Mouse   947 NSGGPPPPPP----PPPPGLAPPPPPGLSFGLSSSSSQYPRKPAIEPSCPMKPLYWTRI------ 1001

  Fly   912 APRPPSVANSTDSTENSGSSPDEPPAANGADAPPTAPPATKEIWTEIEETPLDNIDEFTELFSR- 975
                    ...|.::               ||.||       :|..:||..:.:..||..|||: 
Mouse  1002 --------QINDKSQ---------------DAAPT-------LWDSLEEPHIRDTSEFEYLFSKD 1036

  Fly   976 ---QAIAPVSKPKELKVKRAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTSVVSLEAL 1037
               |...|:|:..|.|.|..|.||:||.:||:.|||:..|||:...:|:.||:.:|.|||.||.|
Mouse  1037 TTQQKKKPLSEAYEKKNKVKKIIKLLDGKRSQTVGILISSLHLEMKDIQQAIFTVDDSVVDLETL 1101

  Fly  1038 QHMSNIQATEDELQRIKE----AAGGDIP-LDHPEQFLLDISLISMASERISCIVFQAEFEESVT 1097
            ..:...:|.||||.:|::    :...|:. ||.|||||.:::.|...:||..||:|:|.|.|.:|
Mouse  1102 AALYENRAQEDELTKIRKYYETSKEEDLKLLDKPEQFLHELAQIPNFAERAQCIIFRAVFSEGIT 1166

  Fly  1098 LLFRKLETVSQLSQQLIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSKES 1162
            .|.||:|.|::.|:.|:..:.:|.:.::||..|||||||||.||||||::|:||.|||||||:::
Mouse  1167 SLHRKVEIVTRASKGLLHMKSVKDILALILAFGNYMNGGNRTRGQADGYSLEILPKLKDVKSRDN 1231

  Fly  1163 HTTLLHFIVRTYI-------------AQRRKE--------GVHP-----LEIR---------LPI 1192
            ...|:.::|:.|:             :.|.|:        .|||     ||::         .|:
Mouse  1232 GMNLVDYVVKYYLRYYDQCKHHDQEASCRGKDLFSLYFHIAVHPQRKSGLELKQEAGTDKSVFPL 1296

  Fly  1193 PEPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVLAASRPEIMEPFKSKMEEFVEGADKSM 1257
            |||.|...|:|:.||::.:.:..|.::....::....|...|..|.::|||.|:|||.:.|.|..
Mouse  1297 PEPQDFFLASQVKFEDLLKDLRKLKRQLEASEQQMKLVCKESPREYLQPFKDKLEEFFKKAKKEH 1361

  Fly  1258 AKLHQSLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTNFTNDFKDIWKKEITSLLNE 1322
            ......|:..:..|..|:.::...||...   .:.||...|..|..|.:|||.|||:|..::..|
Mouse  1362 KMEESHLENAQKSFETTVGYFGMKPKTGE---KEVTPSYVFMVWFEFCSDFKTIWKRESKNISKE 1423

  Fly  1323 LMK--KSKQAQIESRRNVSTKVEKSGRISLKERMLMRRS 1359
            .:|  ::..:::.|.:.|.|| :.:...|||||:..:.:
Mouse  1424 RLKMAQASVSKLTSEKKVETK-KINPTASLKERLRQKEA 1461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 161/470 (34%)
Fmn1NP_034360.2 Microtubule-binding 1..624 107/514 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..192 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..329 23/108 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..413 7/39 (18%)
PHA03247 <449..706 CDD:223021 77/403 (19%)
Mediates interaction with alpha-catenin 458..842 103/548 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..534 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..598 14/63 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 681..713 12/43 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 840..897 18/56 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 913..989 31/79 (39%)
FH2 984..1417 CDD:214697 161/471 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1446..1466 5/16 (31%)

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