DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and Kcnk9

DIOPT Version :10

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_445857.2 Gene:Kcnk9 / 84429 RGDID:621451 Length:396 Species:Rattus norvegicus


Alignment Length:134 Identity:31/134 - (23%)
Similarity:47/134 - (35%) Gaps:51/134 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 RASAKELTLLV---FFLVLGIVIFASL----------VYYAERI--------------------- 368
            |.:.:.|:|:.   .:|::|..:|.:|          ...||.:                     
  Rat     3 RQNVRTLSLIACTFTYLLVGAAVFDALESDHEMREEEKLKAEEVRLRGKYNISSDDYQQLELVIL 67

  Fly   369 QPNPHNDFNSIPLGLWW--------ALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVP 425
            |..||.      .|:.|        |:..:||:|||..||.|..|.   |.|....||.|.|.:.
  Rat    68 QSEPHR------AGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGK---AFCMFYAVLGIPLTLV 123

  Fly   426 VIVS 429
            :..|
  Rat   124 MFQS 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB_Shaw-like 24..135 CDD:349723
Ion_trans 188..439 CDD:459842 31/134 (23%)
PRK14959 <418..>585 CDD:184923 4/12 (33%)
Kcnk9NP_445857.2 Ion_trans_2 <73..132 CDD:462301 19/64 (30%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:Q9NPC2 93..98 3/4 (75%)
Ion_trans_2 <184..243 CDD:462301
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:Q9NPC2 199..204
X-gate. /evidence=ECO:0000250|UniProtKB:Q9NPC2 243..248
Blue background indicates that the domain is not in the aligned region.

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