DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and Ork1

DIOPT Version :10

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_061504627.1 Gene:Ork1 / 5667673 VectorBaseID:AGAMI1_013932 Length:891 Species:Anopheles gambiae


Alignment Length:300 Identity:56/300 - (18%)
Similarity:97/300 - (32%) Gaps:143/300 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 DLDTEKPSEE--------------------ELARK-FGFEEDYYKGTISWWQEMK---PRIWSLF 179
            ||:||:.:||                    ||.|| .|..::|....::.:.|.:   |.:|..:
Mosquito    30 DLETERRAEELAERIEINEMLVRYLSPEDMELQRKLIGRLDEYCGSRVTNYTEDEYEPPYVWDFY 94

  Fly   180 DEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDMRVPIVRNITVKTANGSNGWFLDKTQTNAHI 244
            ...|.:           |.||                     .||...|           .:.|.
Mosquito    95 HSFYFA-----------FIIC---------------------STVGYGN-----------ISPHN 116

  Fly   245 AFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENADIL 309
            .|..|         |.|....|..|         ||        .|:.             |.:.
Mosquito   117 TFGRI---------FLIFYALIGLP---------VN--------GFFF-------------AYVG 142

  Fly   310 EFFS--IIRIMRLFKLTRHSSGLKILIQTFRASAKE---------LTLLVFFLVLGIVIF----A 359
            ||::  .:|:.|.:|             .::.||..         :..:|.:|:.|:::|    |
Mosquito   143 EFWARGFVRLYRRYK-------------AYKLSANAGYAPRRISFIGQIVLYLIPGVIVFIFAPA 194

  Fly   360 SLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMA 399
            .:..|.|:.   |::      :.::::.||:||:|:||.|
Mosquito   195 CVFTYFEQW---PYD------VSVYYSFVTLTTIGFGDYA 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB_Shaw-like 24..135 CDD:349723
Ion_trans 188..439 CDD:459842 39/226 (17%)
PRK14959 <418..>585 CDD:184923
Ork1XP_061504627.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.