DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and kcns3b

DIOPT Version :10

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001032460.1 Gene:kcns3b / 558674 ZFINID:ZDB-GENE-051120-78 Length:424 Species:Danio rerio


Alignment Length:447 Identity:136/447 - (30%)
Similarity:227/447 - (50%) Gaps:59/447 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ENRVVLNVGGIRHETYKATLKKIPATRLSRL---------TEALANYDPILNEYFFDRHPGVFAQ 79
            |:.|.||:|||.|:..:..|.:.|.||:::|         .|...:|.|...||:|||.|.||..
Zfish    14 EDLVNLNIGGIHHKVERCVLLRFPHTRVAQLIQCHSDAAILELCDDYSPTEQEYYFDRSPQVFHC 78

  Fly    80 VLNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEK 144
            |||:||||..|...::|...|.:|:|:|||....::.||...:.:.:|..|    |:.....::.
Zfish    79 VLNFYRTGHFHTLEELCVFCFSQEIEYWGLCELDLDACCLEWFLERKDEHE----LNSSGQSSKN 139

  Fly   145 PSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLK 209
            .|..|::..   .||.:|.......:::..:|...::|..|..::.:..|||..|.||||:.|:.
Zfish   140 ASSGEISVT---SEDLWKSEGMRCSDVRKLMWETLEDPQHSRCSRGVAAVSVLVILISILAMCVH 201

  Fly   210 THPDMRVPIVRNITVKTANGSNGWFLDKTQTNA-HIAFFYIECVCNAWFTFEILVRFISSPNKWE 273
            :.|:.|.                      ||:. |.....:|..|..:|:.|..:|.|::|....
Zfish   202 SLPEFRY----------------------QTDGEHSVLDSVELFCIVFFSVEFFLRVIAAPQPLR 244

  Fly   274 FIKSSVNIIDYIATLSFYIDLVLQRF--ASHLENADILEFFSIIRIMRL------FKLTRHSSGL 330
            |:.:.:|:||..:.|.|||.|.::|.  ....||..::....:::::||      .||.|||.|:
Zfish   245 FLGNPLNMIDVASILPFYITLAVERLDEEDKEENQSLVNMGRVVQVLRLMRSFRVLKLARHSEGM 309

  Fly   331 KILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGY 395
            :...:|......|:.|||.|:.:||..|::.:||.|:.:.:  :..:|||:..||.:::||||||
Zfish   310 RAFGETLMNCQCEVGLLVLFITVGISFFSTFIYYTEKEEAS--SQLSSIPICWWWGIISMTTVGY 372

  Fly   396 GDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 452
            ||:.|.|..|..|..:|.|.|:|.|:||:.:|::||:.|:          :|.|:.|
Zfish   373 GDVYPLTVAGRIVATVCILCGLLVISLPITIIMNNFSKYF----------EKNRKCL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB_Shaw-like 24..135 CDD:349723 43/119 (36%)
Ion_trans 188..439 CDD:459842 81/259 (31%)
PRK14959 <418..>585 CDD:184923 11/35 (31%)
kcns3bNP_001032460.1 BTB_POZ 15..117 CDD:453885 38/101 (38%)
Ion_trans 186..414 CDD:459842 81/261 (31%)

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