DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and Kcns1

DIOPT Version :10

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_032461.2 Gene:Kcns1 / 16538 MGIID:1197019 Length:497 Species:Mus musculus


Alignment Length:442 Identity:138/442 - (31%)
Similarity:226/442 - (51%) Gaps:54/442 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LNVGGIRHETYKATLKKIPATRLSRLTEALA---------NYDPILNEYFFDRHPGVFAQVLNYY 84
            :||||:|.......|.:.|.|||.||..|.:         :||...:|::||||||.|..:|::|
Mouse    23 VNVGGVRRLLSARALARFPGTRLGRLQAAASEEQARRLCDDYDAAAHEFYFDRHPGFFLGLLHFY 87

  Fly    85 RTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPS--- 146
            |||.||...::|...|.:|.::|||..|.:..||...|.:.|     :|.....|.|::.||   
Mouse    88 RTGHLHVLDELCVFAFGQEADYWGLGENALATCCRARYLERR-----VARPRAWDEDSDAPSSVD 147

  Fly   147 ---------EEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICIS 202
                     :.|||| :|         .:....::.|:|...:.|..|..:|....||:..:..|
Mouse   148 PCPDEISDVQRELAR-YG---------AARCGRLRRRLWLTMENPGYSLPSKLFSCVSIGVVLAS 202

  Fly   203 ILSFCLKTHPDMRVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFIS 267
            |.:.|:.:.|:.:   .|......|..:.|...::.:.:..:.  .:|..|.|||:||:..|.:.
Mouse   203 IAAMCIHSLPEYQ---AREAAAAVAAVAAGRSAEEVRDDPVLR--RLEYFCIAWFSFEVSSRLLL 262

  Fly   268 SPNKWEFIKSSVNIIDYIATLSFYIDLVL------QRFASHLENAD---ILEFFSIIRIMRLFKL 323
            :|:...|....:|:||.::.|.||:.|:.      ||.||..|..|   :::.|.::||.|:.||
Mouse   263 APSTRNFFCHPLNLIDIVSVLPFYLTLLAGAALGDQRGASGEELGDLGKVVQVFRLMRIFRVLKL 327

  Fly   324 TRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALV 388
            .|||:||:.|..|.:.|.:|:.:|:.:|.:|:.:|:.:.|.||    ..:..|::||...||..|
Mouse   328 ARHSTGLRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAE----EENEGFHTIPACWWWGTV 388

  Fly   389 TMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA 440
            :||||||||:.|:|..|....:.|.|.|:|.:|||:.:|.:.|:.:|...:|
Mouse   389 SMTTVGYGDVVPETVGGKLAASGCILGGILVVALPITIIFNKFSHFYRRQKA 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB_Shaw-like 24..135 CDD:349723 42/114 (37%)
Ion_trans 188..439 CDD:459842 82/259 (32%)
PRK14959 <418..>585 CDD:184923 8/23 (35%)
Kcns1NP_032461.2 BTB_POZ 21..126 CDD:453885 39/102 (38%)
Ion_trans 188..439 CDD:459842 82/259 (32%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 392..397 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..497
Blue background indicates that the domain is not in the aligned region.

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