DRSC/TRiP Functional Genomics Resources

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Protein Alignment sob and osr1

DIOPT Version :10

Sequence 1:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001008046.1 Gene:osr1 / 493408 XenbaseID:XB-GENE-481410 Length:259 Species:Xenopus tropicalis


Alignment Length:97 Identity:77/97 - (79%)
Similarity:84/97 - (86%) Gaps:5/97 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 RSKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCA 454
            ::||:|:||||.|.||||||||||||||||||||:||||.||||||||||||||||||||||||.
 Frog   163 KTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 227

  Fly   455 ECGKGFCQSRTLAVHKILH-----MEESPHKC 481
            ||||||||||||||||.||     ::.|..||
 Frog   228 ECGKGFCQSRTLAVHKTLHTQVKELKPSKIKC 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sobNP_476882.1 COG5048 <389..529 CDD:227381 77/97 (79%)
C2H2 Zn finger 397..417 CDD:275368 17/19 (89%)
zf-H2C2_2 409..434 CDD:463886 22/24 (92%)
C2H2 Zn finger 425..445 CDD:275368 18/19 (95%)
zf-H2C2_2 437..460 CDD:463886 21/22 (95%)
C2H2 Zn finger 453..473 CDD:275368 17/19 (89%)
C2H2 Zn finger 481..501 CDD:275368 1/1 (100%)
C2H2 Zn finger 509..529 CDD:275368
osr1NP_001008046.1 zf-C2H2 168..190 CDD:395048 18/21 (86%)
C2H2 Zn finger 170..190 CDD:275368 17/19 (89%)
zf-H2C2_2 182..207 CDD:463886 22/24 (92%)
C2H2 Zn finger 198..218 CDD:275368 18/19 (95%)
zf-H2C2_2 210..233 CDD:463886 21/22 (95%)
C2H2 Zn finger 226..246 CDD:275368 17/19 (89%)
Blue background indicates that the domain is not in the aligned region.

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