DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sob and SP8

DIOPT Version :10

Sequence 1:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_874359.2 Gene:SP8 / 221833 HGNCID:19196 Length:508 Species:Homo sapiens


Alignment Length:598 Identity:152/598 - (25%)
Similarity:205/598 - (34%) Gaps:169/598 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AAAAATC----SDSPAKAAASPAASSDIAEALGELKASATAAASSASKAATSKHHSNNNHKPSAA 74
            |..||||    |.||     ||::.||.:.:.|  |.......||:|.:|               
Human    18 AMLAATCNKIGSPSP-----SPSSLSDSSSSFG--KGFHPWKRSSSSSSA--------------- 60

  Fly    75 ATATAAHKKSESCNSNGNKCTAATSPIGSKTSNAAMAAATATAAAATNDLAAAAAVV---LSLQG 136
                       |||..|:..::......|:...::.|||.|.|||     |||||:|   .|..|
Human    61 -----------SCNVVGSSLSSFGVSGASRNGGSSSAAAAAAAAA-----AAAAALVSDSFSCGG 109

  Fly   137 TMVSSLQQAALLPANSAAAAALNLQALESYLALQRLTGKSDVFRFSNSNTGSSNSNNATTCNSSS 201
            :..||   |..|.::||||||....|..|   .........||:....:.||..........||:
Human   110 SPGSS---AFSLTSSSAAAAAAAAAAAAS---SSPFANDYSVFQAPGVSGGSGGGGGGGGGGSSA 168

  Fly   202 SEADNNALPSLIDIANIELKSSCSSSSSGEPPLTAATASAAATSS---PSSNNSNSTSTPTTSKC 263
            ...|.:..|..|        |...:|..|...:......|....|   ||.              
Human   169 HSQDGSHQPVFI--------SKVHTSVDGLQGIYPRVGMAHPYESWFKPSH-------------- 211

  Fly   264 VPLPSIGTVSAAVAAAA-----------------AAAAAAASQQAALDCATAAELAAECDLPLLD 311
               |.:|......:|.|                 :|||...|...|     |..|......||  
Human   212 ---PGLGAAGEVGSAGASSWWDVGAGWIDVQNPNSAAALPGSLHPA-----AGGLQTSLHSPL-- 266

  Fly   312 GEDALSFEAGDLDSSYGSFMFNPSAFSQAETDSALHSLQATMYQDKMSVISG----AAGGVGAGA 372
                     |..:|.|..  .:.||||...:...|......:......|:.|    :|....|||
Human   267 ---------GGYNSDYSG--LSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLAGA 320

  Fly   373 VGGLEEAGSSAAAAAAQRSKKQFICKFCNRQFTKSYNLLIHER------THTDERPYSCDI--CG 429
            .|.:..||.||....:.||..:   ::..|......|....||      :...:..:||.|  ||
Human   321 GGSMLSAGPSAPLGGSPRSSAR---RYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPGCG 382

  Fly   430 KAFRRQDHLRDHRYIHSKEKPFKC--AECGKGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRS 492
            |.:.:..||:.|...|:.|:||.|  ..|||.|.:|..|..|...|..|....|||||:.|.:..
Human   383 KVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSD 447

  Fly   493 NLKTHLLTHTDIKPYNCASCGKVFRRNCDLRRHSLTHNLSAGVGGVVGGNLSDPFGSGSSSSSEL 557
            :|..|:.||                              |.|.||  ||:      :||.|..:.
Human   448 HLSKHVKTH------------------------------SGGGGG--GGS------AGSGSGGKK 474

  Fly   558 GLPTGSASTAASS 570
            |..|.|..:||.|
Human   475 GSDTDSEHSAAGS 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sobNP_476882.1 COG5048 <389..529 CDD:227381 39/149 (26%)
C2H2 Zn finger 397..417 CDD:275368 4/25 (16%)
zf-H2C2_2 409..434 CDD:463886 9/32 (28%)
C2H2 Zn finger 425..445 CDD:275368 8/21 (38%)
zf-H2C2_2 437..460 CDD:463886 11/24 (46%)
C2H2 Zn finger 453..473 CDD:275368 8/21 (38%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
C2H2 Zn finger 509..529 CDD:275368 0/19 (0%)
SP8NP_874359.2 SP8_N 19..375 CDD:411690 103/445 (23%)
C2H2 Zn finger 379..398 CDD:275368 6/18 (33%)
zf-H2C2_2 390..417 CDD:463886 12/26 (46%)
C2H2 Zn finger 406..428 CDD:275368 8/21 (38%)
zf-H2C2_2 420..443 CDD:463886 9/22 (41%)
zf-C2H2 434..456 CDD:395048 8/21 (38%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)

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