DRSC/TRiP Functional Genomics Resources

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Protein Alignment sob and Zfp87

DIOPT Version :10

Sequence 1:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_573491.2 Gene:Zfp87 / 170763 MGIID:107768 Length:540 Species:Mus musculus


Alignment Length:133 Identity:57/133 - (42%)
Similarity:79/133 - (59%) Gaps:0/133 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 CKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCAECGKGFC 461
            |:.|.:.|.....|..|:|.|:.|.||.|:.|||||.....|:.|:.|||.|||::|.||||.|.
Mouse   195 CEECGKAFYLPSFLKQHQRIHSAENPYRCEECGKAFSYPSTLKQHQRIHSGEKPYRCEECGKAFR 259

  Fly   462 QSRTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHTDIKPYNCASCGKVFRRNCDLRRHS 526
            :|.....|:.:|..|.|::|..|.::|..|||||.|.:.|:.:|||.|..||.:||.:.||.:|.
Mouse   260 RSTYFHQHQRIHTGEKPYQCEECGKTFYYRSNLKGHQIIHSGVKPYKCEVCGSMFRTSSDLSKHQ 324

  Fly   527 LTH 529
            ..|
Mouse   325 RIH 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sobNP_476882.1 COG5048 <389..529 CDD:227381 56/131 (43%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:463886 13/24 (54%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..460 CDD:463886 13/22 (59%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
C2H2 Zn finger 509..529 CDD:275368 8/19 (42%)
Zfp87NP_573491.2 KRAB 5..65 CDD:214630
C2H2 Zn finger 83..103 CDD:275368
COG5048 107..472 CDD:227381 57/133 (43%)
C2H2 Zn finger 111..131 CDD:275368
C2H2 Zn finger 139..159 CDD:275368
C2H2 Zn finger 167..187 CDD:275368
C2H2 Zn finger 195..215 CDD:275368 6/19 (32%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
C2H2 Zn finger 279..299 CDD:275368 9/19 (47%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368
C2H2 Zn finger 419..439 CDD:275368
SFP1 <441..519 CDD:227516
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 474..494 CDD:275368
C2H2 Zn finger 502..522 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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