DRSC/TRiP Functional Genomics Resources

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Protein Alignment sob and drm

DIOPT Version :10

Sequence 1:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_061518726.1 Gene:drm / 1277975 VectorBaseID:AGAMI1_011666 Length:97 Species:Anopheles gambiae


Alignment Length:105 Identity:40/105 - (38%)
Similarity:59/105 - (56%) Gaps:32/105 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 RSKKQFICKFCNRQFTKSYNLLIHERTH-TDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKC 453
            |.|.:|:||:|.|:|||.|||:|||||| :.|..:||::|||.|:|||:||.||          |
Mosquito    21 RPKCEFVCKYCQRRFTKPYNLMIHERTHKSPEVTFSCEVCGKYFKRQDNLRSHR----------C 75

  Fly   454 AECGKGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRSN 493
            ::|           :.:.:||:          |:.|..:|
Mosquito    76 SQC-----------IWRSIHMD----------RTMNGNNN 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sobNP_476882.1 COG5048 <389..529 CDD:227381 40/105 (38%)
C2H2 Zn finger 397..417 CDD:275368 14/19 (74%)
zf-H2C2_2 409..434 CDD:463886 15/25 (60%)
C2H2 Zn finger 425..445 CDD:275368 12/19 (63%)
zf-H2C2_2 437..460 CDD:463886 6/22 (27%)
C2H2 Zn finger 453..473 CDD:275368 2/19 (11%)
C2H2 Zn finger 481..501 CDD:275368 3/13 (23%)
C2H2 Zn finger 509..529 CDD:275368
drmXP_061518726.1 None
Blue background indicates that the domain is not in the aligned region.

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