DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and pkp4

DIOPT Version :10

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:XP_012826046.1 Gene:pkp4 / 780351 XenbaseID:XB-GENE-489870 Length:1195 Species:Xenopus tropicalis


Alignment Length:788 Identity:300/788 - (38%)
Similarity:422/788 - (53%) Gaps:118/788 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HSLIGLN----MNSTHINMDLSLTHEPANMQSQFGSFQNYDQFSAAGYSSTPLY----ITKPTGV 64
            ||.:|.:    |.|:.......:|..|.:|.:...:..:.||:   |.....:|    ..:|..:
 Frog   325 HSRVGSSSQTPMGSSSSPKRAGMTAVPQHMGTLQRNLHDIDQY---GQQHFDIYERMVPPRPDSL 386

  Fly    65 -GAITKVAPHCSQNKIETNSTDNSIPDIENHPLATTVRYVQAGQYEDTSEYGVA---GLTCGIDS 125
             |..:..|...||...|..|..:  ||::..|:           ||..:.|...   .....|:.
 Frog   387 TGLRSSYASQHSQLGQELRSAVS--PDLQITPI-----------YEGRTYYSPVYRNANHAAIEL 438

  Fly   126 EYTAEAVVPYCYTSDANYTGIQNTTSSIKPFSGRPFNDNINGAEAVADSQCRTFKSSAEFKLPQF 190
            ...:...:   |.:.:..:.:|.|.|.....:.:..|..:|.|...|:          .::..|:
 Frog   439 RQGSNTAI---YRTGSGSSNLQRTMSQRSTLAYQRNNYALNSAANYAE----------PYRSMQY 490

  Fly   191 AMS--SINTVPQRLEEKD--------DYIEGSENDICSTMRWRDPNLSEVISFLSNPSSAIKANA 245
            .:|  ..|.:|......|        |.|:....:..    ||||.|.|||..|.:...:::|||
 Frog   491 RISEPGYNRMPHSAPPDDGTTRSPSIDSIQKDPREFA----WRDPELPEVIHMLQHHFPSVQANA 551

  Fly   246 AAYLQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDSPEIHKNACGALRNLSYGRQNDENKRGIKNA 310
            ||||||||:.|...|.....||||..||.||.....|:.||||||||||.||:..||||..:|||
 Frog   552 AAYLQHLCFGDHKTKIEVCRLGGIKHLVDLLDNKVLEVQKNACGALRNLVYGKSTDENKVAVKNA 616

  Fly   311 GGIAALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEALVAVVCSVIKPHSGWDAVCCGE 375
            ||:.||:.||.::.:.||:|||||||||:|||:.:|.:||.:||..:..:||.||||::     .
 Frog   617 GGVPALLRLLRKTNDQEVRELVTGVLWNLSSCDAVKMTIIRDALSPLTNTVIVPHSGFN-----N 676

  Fly   376 TCF----------STVFRNASGVLRNVSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGNKT 430
            :.|          |:|.||.:|.:||:|||||.||..:|.||.||:.||:|::|.:..::..:||
 Frog   677 SSFDDDHKMKFQSSSVLRNTTGCMRNLSSAGEEARKQMRYCEGLVDSLLFVIQTCVNTSDFDSKT 741

  Fly   431 VENCVCILRNLSYRCQEVDDPNYDKHPFITPERVI----------PSSSKGENLGCFG-TNKKKK 484
            ||||||.|||||||. |::.|.         .|::          .|.||..:..|:| ..||||
 Frog   742 VENCVCTLRNLSYRL-ELEVPQ---------ARMLGINEMDGFCKESPSKESDSSCWGKKKKKKK 796

  Fly   485 EANNSDALNEYNISADYSKSSVTYNKLNKGYEQLWQPEVVQYYLSLLQSCSNPETLEAAAGAIQN 549
            :....|..:........|:|.       ||.|.||.|.||:.||:||...|||.|||.:||::||
 Frog   797 KPPQEDLWDGVGPIPGLSQSP-------KGVEMLWHPSVVKPYLTLLAESSNPATLEGSAGSLQN 854

  Fly   550 LSACYWQPSIDIRATVRKEKGLPILVELLRMEVDRVVCAVATALRNLAIDQRNKELIGKYAMRDL 614
            |||..|:.:..|||.||||||||||||||||:.||||.:|||||||:|:|.||||||||||||||
 Frog   855 LSAGNWKFAAYIRAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMALDVRNKELIGKYAMRDL 919

  Fly   615 VQKLPSGN---VQHDQNTSDDTITAVLATINEVIKKNPEFSRSLLDSGGIDRLMNITKRKEKYTS 676
            |.:||.||   |     .||||:.|:...::||..||.|.:::|.|:|||::|:||||.|...:|
 Frog   920 VNRLPGGNGPCV-----LSDDTVAAICCALHEVTSKNMENAKALADTGGIEKLVNITKGKGDRSS 979

  Fly   677 C-VLKFASQVLYTMWQHNELRDVYKKNGWKEQDFVS-------KHFTAHNTPPSSPNNVNNTLNR 733
            . |:|.|:|||.|:||:.:||.:|||:||.:..|::       :.|.:|    .|.:..|..::.
 Frog   980 LKVVKAAAQVLNTLWQYRDLRSIYKKDGWNQSHFITPVSTLERERFKSH----PSLSTTNQQMSP 1040

  Fly   734 PMASQGRT 741
            .:.|.|.|
 Frog  1041 MIQSVGST 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 armadillo repeat 227..252 CDD:293788 13/24 (54%)
Arm 256..295 CDD:425727 20/38 (53%)
armadillo repeat 260..296 CDD:293788 20/35 (57%)
ARM 300..341 CDD:214547 24/40 (60%)
armadillo repeat 304..339 CDD:293788 20/34 (59%)
armadillo repeat 347..392 CDD:293788 17/54 (31%)
armadillo repeat 515..556 CDD:293788 23/40 (58%)
Arm 516..552 CDD:425727 21/35 (60%)
ARM 560..597 CDD:214547 30/36 (83%)
armadillo repeat 562..596 CDD:293788 28/33 (85%)
armadillo repeat 601..641 CDD:293788 25/42 (60%)
pkp4XP_012826046.1 armadillo repeat 533..558 CDD:293788 13/24 (54%)
Arm 562..601 CDD:425727 20/38 (53%)
armadillo repeat 566..602 CDD:293788 20/35 (57%)
PLN03200 573..>744 CDD:215629 85/175 (49%)
Arm 606..647 CDD:425727 24/40 (60%)
armadillo repeat 610..645 CDD:293788 20/34 (59%)
armadillo repeat 652..703 CDD:293788 18/55 (33%)
armadillo repeat 711..752 CDD:293788 20/40 (50%)
armadillo repeat 820..857 CDD:293788 21/36 (58%)
PLN03200 850..>971 CDD:215629 76/125 (61%)
ARM 867..902 CDD:214547 29/34 (85%)
armadillo repeat 869..901 CDD:293788 26/31 (84%)
armadillo repeat 908..949 CDD:293788 25/45 (56%)
armadillo repeat 955..990 CDD:293788 16/34 (47%)

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