DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Gpb5 and LHB

Sequence 1:NP_001104334.1 Gene:Gpb5 FlyBaseID:FBgn0063368 Length:169 Species:Drosophila melanogaster
Sequence 2:XP_011525277.1 Gene:LHB HGNCID:6584 Length:157 Species:Homo sapiens

Alignment Length:56 Identity:13/57 (23%)
Similarity:23/57 (40%) Gaps:3/57 (5%)


  Fly    96 VCVHAQRQLVVAILKNCHPKAEDSVSKYQYMEAVNCHCQTCSTQDTSCEAPANNEM 151
            ||.:...:.....|..| |:..|.|..:..  |::|.|..|....:.|..|.::.:
Human    92 VCTYRDVRFESIRLPGC-PRGVDPVVSFPV--ALSCRCGPCRRSTSDCGGPKDHPL 144

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Gpb5NP_001104334.1 GHB_like 45..144 CDD:200450 12/48 (25%)
LHBXP_011525277.1 GHB 41..147 CDD:214502 13/57 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C99821489
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1362225at2759
OrthoFinder 1 1.000 FOG0001553
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11515
Phylome 1 0.910 0.667 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.950

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