DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpb5 and gphb5

DIOPT Version :10

Sequence 1:NP_001104334.1 Gene:Gpb5 / 3355097 FlyBaseID:FBgn0063368 Length:169 Species:Drosophila melanogaster
Sequence 2:XP_017952316.1 Gene:gphb5 / 100494400 XenbaseID:XB-GENE-993177 Length:126 Species:Xenopus tropicalis


Alignment Length:109 Identity:36/109 - (33%)
Similarity:52/109 - (47%) Gaps:7/109 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NNGHIVTPLGCHRRVYTYKVTQSDLQGHECWDYVSVWSCWGRCDSSEISDWKFPYKRSFHPVCVH 99
            :|..:.|.:||..|.:|:...:...:|..    |:..:|||||::.|......||..:.|.||.:
 Frog    22 SNISLRTFIGCAVREFTFLAKKPGCKGLR----VTTDACWGRCETWEKPVLDPPYIEAHHRVCTY 82

  Fly   100 AQRQLVVAILKNCHPKAEDSVSKYQYMEAVNCHCQTCSTQDTSC 143
            .:.:||...|.||.|   |....:.|..||.|.|..|||..|.|
 Frog    83 NETKLVTVKLPNCSP---DIDPFFTYPVAVRCDCDICSTSTTEC 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpb5NP_001104334.1 GHB_like 45..144 CDD:200450 33/99 (33%)
gphb5XP_017952316.1 GHB_like 32..126 CDD:200450 33/99 (33%)

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