DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS3 and ints-3

DIOPT Version :10

Sequence 1:NP_001036437.1 Gene:IntS3 / 3355010 FlyBaseID:FBgn0262117 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_001293423.1 Gene:ints-3 / 3565441 WormBaseID:WBGene00022360 Length:1052 Species:Caenorhabditis elegans


Alignment Length:1163 Identity:269/1163 - (23%)
Similarity:503/1163 - (43%) Gaps:208/1163 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEQQQSKNNAHVSKLF-ICTAVDCKDDIEEKFERSFVTLQMQISGLSDKEMHDMLSQAVCKEKQH 64
            |.:||::   .:.||. |....:...::..:.....:.|..:|:|.||||:.|::   :.|| :|
 Worm     1 MNEQQTR---RIQKLMKINLKCETPPELVARLANDSIVLDSRITGKSDKEVIDIM---ISKE-EH 58

  Fly    65 EEISIGFLYIMLT---DPSMASKTYRDVTLVSRDGMNGIVTNLTFLVAEKYTKLTEVARRQLIWL 126
            :..|||.:|.:||   :|.:..|..|.||....:..:.::.|:..::.|.:..|..:.:.||:.|
 Worm    59 DVKSIGLMYHILTSGENPDLFGKMIRYVTGGGAEYWHHVLCNMNMILFEVWPFLHLLCKEQLLRL 123

  Fly   127 LREFVKHQVLSVENVIWNCLRQA-GGGDVSSRNLFLIESLLDIFIEFRTWLETN---PFLVQSTV 187
            :||.|:..|..||||:.|..|.: |..|.:::....:: |..:..|...|.::.   ..||.:.:
 Worm   124 IREAVRQNVKQVENVLMNAFRMSIGSSDFATKQRIFMK-LNSMIRENEAWFKSQKACAALVANIL 187

  Fly   188 YSFVRLIEDHANPALLS----LRQKEVKFTISLIRERFHDIIPLGRDFVRLLQNVARIPEFEQLW 248
            .....:|  .::||.:|    .|:.::.....:|:.|..|.:.|||||:.:|..:.::|:.|::|
 Worm   188 TCTTSVI--ISSPAPISSQDTFRESQLDLVQWVIKSRKIDCLTLGRDFILILIRLGKMPQIEEIW 250

  Fly   249 RDILFNPKMLHQTFNGIWQLLHIRTSRRFLQ-CRLLPEMERKISFLASSVKFG-NQKRYQDWFQD 311
            :||:.||...     |:..|....|.:..|| .|:..|:|||:.|:.  |..| |...|..|..:
 Worm   251 KDIVANPASF-----GVSNLEEYMTKQNVLQHVRISIELERKVQFMV--VNGGKNLLTYFTWLNN 308

  Fly   312 KYFATPESHSLRSDLIRFIINV-IHPTNDM------------LCSDIIPRWAIIGWLISSCTNPI 363
            |:|...:..:||::.:|::::: :.|...:            |....:|....:.||        
 Worm   309 KFFRANDGPALRAECVRYVLSMNLDPAKALPNAQENRVQLLHLLISTVPSGPELQWL-------- 365

  Fly   364 ASANAKLSLFYDWLFFDPAKD-NIMNIEPGILVMYHSIRNHP----------------FVSSTLL 411
                 ||.||.||...|.... |:|.:|....|:.:::...|                |.:| ||
 Worm   366 -----KLCLFADWFGCDDKNSANLMCVENSFSVVRYALFLTPTGPQQNSIVQGSHCSQFANS-LL 424

  Fly   412 DFLCRITKNFF-VKHEDKIRIGVYNSLKLILEKQVIPNLQPLFESPKLDRELRNLIRDNFREFLS 475
            :|||:...... ..:.:.||..|.::::.|.:: :..||..:.|:.|:||::..|:|:.|.:|:.
 Worm   425 EFLCKSVDVLLPPAYAEPIRRNVNSAMRFIKDR-LQHNLPQILENSKIDRKVSELLRNVFPDFVR 488

  Fly   476 PPANHGQLLFTSLHPVQGHILKKESDQRIL----HCENMDLHETGLINISGT--IDED--KKILL 532
            .|..:..::.............|.|.:..|    ..|........|.:.|.|  |:::  ||.:.
 Worm   489 NPIGNSSIIRPKKKSTDEEKAIKSSSEPALSEQKSTEKPSFSTEKLSSDSATTKIEKEKLKKAIE 553

  Fly   533 VPTDQEIESVFSDETAENLRRVHNIEDNTDDDDDLPLSEVRLKEKPKVELAEAIAESFDAFVTKR 597
            ...:||:..:......|...::..::|...:.||         :..|.|..|.:..|   .:|  
 Worm   554 EQEEQELNVLIKQLQGEIGTKIAKLKDQWKEFDD---------DADKCEAVEGLLVS---LLT-- 604

  Fly   598 NSYTWEAFLKDFRPLPASAFEEFQLNYVISNTVLILRETLPQQNIFSESKTEEKHLAKSISYPLY 662
               |.:.|.:..:.|.|..     |..::.:.|...:..||         ..||.|:::.::|:|
 Worm   605 ---TGDVFDESQQELAAQC-----LLGIMGSVVADEQSLLP---------PNEKDLSEAFTHPIY 652

  Fly   663 GLFRFLY---ENDEKSKKPFQTLLSEICEGIPEIGYLLLYFMK----------IYCKLQTRKNSQ 714
            ...:.|.   :|||.|......:::.:.|....:.|:.|||:|          |.|         
 Worm   653 SFLKVLCSPPDNDEASSDVMAAMMAAMREKDSSLTYVFLYFIKGTAGGRPTECIEC--------- 708

  Fly   715 QSYQFKTTIYRQICDAADEKIGNCLLRDLDLLEKENTNIFLWLLPDIYREFKSIATNNTDLLRIT 779
                     |:.|...:...:...|..||.|....:..:|.:|:|.::.:|:....:...||...
 Worm   709 ---------YKNIAKMSGRSVDEMLASDLQLCAVNDNRLFAYLVPFVFSQFEEEVMSTPALLATL 764

  Fly   780 LRCIDAKNVRDILYSIAQGKLTIFKQDGLIDCIRQSLEFETYEQFCLWQIVQAHDVPLRCIQDIL 844
            ...:||..:|..:..|.:.::.||:::.....:..|:::.|..|:..|.:|.|..||:......:
 Worm   765 CANLDAIQLRSFVSEIIREEIKIFRKESFPKMVMDSVDWATTPQWVFWHLVHADGVPIEWFLSTI 829

  Fly   845 PELEAGSHPEALSHFLLLLK--NEEPTNEIIRLMLSRESKSKGDPFVTSALRFWCQRYE--EKLS 905
            |:.:|..|.||:::.||::|  :.||...:||.:.:| ..:|.|.|...|::...:..|  :|::
 Worm   830 PKFDAVGHDEAIANILLMMKRMDREPWAGLIRALFNR-VPNKDDTFTIDAMKVLIEDSEQCQKVA 893

  Fly   906 EIIASLLTSKYPSSS-------PNKRKRPPKGISVSTSTPSADQVLNHLEHYRRSC----RHGTG 959
            ||:|.|:.....::.       .:|:..|.|        .:..|||.||:|:..:|    :..|.
 Worm   894 EIVAQLIKKLLGNNDIIGLGVRVHKKGNPMK--------LTLQQVLEHLQHFSSTCVEKKQRMTE 950

  Fly   960 TGLYVHDMMQRA-LQSAYSHSNDSTK-----KQFCDLFAL--AAEEDTTVGRRGGSGRGRKQPGS 1016
            |      .|.|: ||.|::....:.|     |::.:||..  ...:||.......:.||.:|   
 Worm   951 T------FMSRSHLQEAFASIKVNDKAVVLVKKYGNLFGAMDIIAQDTKEHSSSRTLRGNRQ--- 1006

  Fly  1017 KKDVNNHGTSKKNPEMVKTIYSSDDNSSEEDWSKSKILQTAKRRKKANN------DSD 1068
                   |||.:..:| :.::......:|:|      .|.:|:||..||      |||
 Worm  1007 -------GTSAERQQM-QQMHHQKRKPNEDD------EQNSKKRKMHNNIIELSDDSD 1050

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS3NP_001036437.1 Ints3_N 62..467 CDD:431123 112/448 (25%)
ints-3NP_001293423.1 Ints3_N 56..481 CDD:431123 113/450 (25%)

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