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Protein Alignment MED21 and srb7
DIOPT Version :10
| Sequence 1: | NP_001015223.1 |
Gene: | MED21 / 3354977 |
FlyBaseID: | FBgn0040020 |
Length: | 142 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_596630.1 |
Gene: | srb7 / 2540209 |
PomBaseID: | SPBC1604.10 |
Length: | 138 |
Species: | Schizosaccharomyces pombe |
| Alignment Length: | 128 |
Identity: | 38/128 - (29%) |
| Similarity: | 61/128 - (47%) |
Gaps: | 15/128 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MADRLTQLQDTVNQQAEHFCNAIGVIQQ----TSLPSKFVNFERIGPQTPIPCPPQE-DYAQ--L 58
||.|.||||||:::.|..|.::|..:.. ..||.: |::......|...:| .:|| |
pombe 1 MACRCTQLQDTIDEVATQFYSSIHYLSSHHDFVPLPGQ----EKVSDSKVNPISAEELQFAQRDL 61
Fly 59 FAQLIARCAKDIDTLIESLPNEDSSIELQNSSLKRLE---IENQGTARDLEEVVQKGELLLEK 118
...|:.:..: |||||..||...::.:.|...:|:|: .|.|...:.||...:..:|.|.|
pombe 62 AKDLVTKFMQ-IDTLINQLPGISTAPKHQLEKIKKLQNSIEEKQLERKSLESENEDLKLQLAK 123
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| MED21 | NP_001015223.1 |
Med21 |
3..128 |
CDD:463241 |
36/126 (29%) |
| srb7 | NP_596630.1 |
Med21 |
3..130 |
CDD:463241 |
36/126 (29%) |
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