Protein Alignment rl and cdk7

DIOPT Version :10

• Sequence 1: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_998126.2
• Gene: cdk7 / 405897
• ZFINID: ZDB-GENE-010320-2
• Length: 345
• Species: Danio rerio
• Alignment Length: 350
• Identity: 125/350 - (35%)
• Similarity: 180/350 - (51%)
• Gaps: 40/350 - (11%)

  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQ----RT-LREITILTRFKHENI 96
            ||.||.::|||.:..|..|.|..||..||||||. ..|:|..:    || ||||.:|....|.||
Zfish    11 RYEKLDFLGEGQFATVYKARDKTTNTIVAIKKIK-VGHRTEAKDGINRTALREIKLLQELSHPNI 74

  Fly    97 IDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQR--LSNDHICYFLYQILRGLKYIHSANVL 159
            |.:     :|:.....::.:|...|||||..::|...  |:..:|..::...|:||:|:|:..:|
Zfish    75 IGL-----LDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYILMTLQGLEYMHNHWIL 134

  Fly   160 HRDLKPSNLLLNKTCDLKICDFGLAR-IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 223
            ||||||:||||::...||:.|||||: ...|...:    |..|.||||||||::..::.|...:|
Zfish   135 HRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVY----THQVVTRWYRAPELLFGARMYGVGVD 195

  Fly   224 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPW 288
            :|:|||||||:|...|...|...||||..|...||:|: |::...:: ...:|:...|| |..|.
Zfish   196 MWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPT-DEIWPGMS-SLPDYVSFKPF-PGTPL 257

  Fly   289 AKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVP------------ 341
            ..:|..|....|:||..:.|:||..|....:||...|...  .||..|..::|
Zfish   258 EHIFSAAGDDLLELLRGLFTYNPCSRTTAMQALKMKYFSN--RPGPTPGPQLPRPNSSTEALKEK 320

  Fly   342 ----FRINMENDDISRDAL-KSLIF 361
                ..|..:.|.|.:..| |.|:|
Zfish   321 ENLLIGIKRKRDSIEQGTLKKKLVF 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	124/349 (36%)
cdk7	NP_998126.2	STKc_CDK7	11..308	CDD:270833	117/311 (38%)