DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and Cdk20

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001020923.2 Gene:Cdk20 / 364666 RGDID:1305219 Length:346 Species:Rattus norvegicus


Alignment Length:333 Identity:109/333 - (32%)
Similarity:182/333 - (54%) Gaps:57/333 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQRTLREITILTRFKHENIIDIRD 101
            :|..|..|||||:|:|..|....|.:.||:||::           ||.:        |:.|..:.
  Rat     3 QYCILGRIGEGAHGIVFKAKHVETGEIVALKKVA-----------LRRL--------EDGIPNQA 48

  Fly   102 ILRVDSIDQMRD-VYIVQC---------------LMETDLYKLLK-TQR-LSNDHICYFLYQILR 148
            :..:.::.::.| .|:||.               .|.:||.:::: .|| |:...:..:|..:|:
  Rat    49 LREIKALQEIEDSQYVVQLKAVFPHGAGFVLAFEFMLSDLAEVVRHAQRPLAPAQVKSYLQMLLK 113

  Fly   149 GLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML 213
            |:.:.|:.|::||||||:|||::.:..|||.||||||:..|  |.....|..||||||||||::.
  Rat   114 GVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSP--DGGRLYTHQVATRWYRAPELLY 176

  Fly   214 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSR---DDLECIINEKARN 275
            .::.|.:.:|:|:||||:.|:|:..|:|||::.::||..:|.:||:||.   .::..:.:....:
  Rat   177 GARQYDQGVDLWAVGCIMGELLNGSPLFPGENDIEQLCCVLRILGTPSPRVWPEITELPDYNKIS 241

  Fly   276 YLESLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYY-------DPG 333
            :.|..|    ||..::.|:|...||||||:.|.:.|.:||...:||.|    ||:       .|.
  Rat   242 FKEQAP----VPLEEVLPDASHQALDLLGQFLLYPPRQRIAASQALLH----QYFFTAPLPAHPS 298

  Fly   334 DEPVAEVP 341
            :.|:.:.|
  Rat   299 ELPIPQRP 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 109/333 (33%)
Cdk20NP_001020923.2 STKc_CCRK 3..289 CDD:270826 106/314 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..324 2/9 (22%)

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