Protein Alignment rl and Cdk7

DIOPT Version :10

• Sequence 1: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_511044.1
• Gene: Cdk7 / 31441
• FlyBaseID: FBgn0263237
• Length: 353
• Species: Drosophila melanogaster
• Alignment Length: 344
• Identity: 128/344 - (37%)
• Similarity: 187/344 - (54%)
• Gaps: 27/344 - (7%)

  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI---SPFEHQTYCQRT-LREITILTRFKHENII 97
            ||.||:::|||.:..|..|.||:|||.||:|||   |..:.:....|| ||||.||...:|||||
  Fly    11 RYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHENII 75

  Fly    98 DIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQR--LSNDHICYFLYQILRGLKYIHSANVLH 160
            .:     ||...|:.:|.:|...|:|||..::|..:  |:..:|..:....|:||:|:|...:||
  Fly    76 GL-----VDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWILH 135

  Fly   161 RDLKPSNLLLNKTCDLKICDFGLAR-IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 224
            |||||:|||:|....|||.|||||: ...|..    ..|.:|.|||||:||::..::.|...:|:
  Fly   136 RDLKPNNLLVNSDGILKIGDFGLAKSFGSPNR----IYTHHVVTRWYRSPELLFGARQYGTGVDM 196

  Fly   225 WSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWA 289
            |:|||||||::...|..||...||||..|...||:|:..:...:  .|..:||:...| |..|..
  Fly   197 WAVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHL--SKLHDYLQFRNF-PGTPLD 258

  Fly   290 KLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRI-------NME 347
            .:|..|....:.|:.::...||.:|:...|||:.||......|...|...:|..|       |.:
  Fly   259 NIFTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVGPKLPMPSAILAAKEGANPQ 323

  Fly   348 NDDISRDALKSLIFEETLK 366
            ..| ::.|||..:.|.|::
  Fly   324 TGD-TKPALKRKLVETTVR 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	128/342 (37%)
Cdk7	NP_511044.1	STKc_CDK7	11..308	CDD:270833	119/308 (39%)