DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and mapk8

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_012821606.1 Gene:mapk8 / 100170194 XenbaseID:XB-GENE-1217556 Length:426 Species:Xenopus tropicalis


Alignment Length:364 Identity:143/364 - (39%)
Similarity:225/364 - (61%) Gaps:33/364 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IFEVG-------PRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS-PFEHQTYCQRTLREITI 87
            :||:|       .||..|..||.||.|:|.:|.|.:..:.|||||:| ||::||:.:|..||:.:
 Frog    12 VFEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLERHVAIKKLSRPFQNQTHAKRAYRELVL 76

  Fly    88 LTRFKHENIIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLK 151
            :....|:|||.:.::.... |:::.:|:|||..||:.:|.::::.: |.::.:.|.|||:|.|:|
 Frog    77 MKCVNHKNIIGLLNVFTPQKSLEEFQDLYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIK 140

  Fly   152 YIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGF-LTEYVATRWYRAPEIMLNS 215
            ::|||.::||||||||:::...|.|||.||||||.|.     |.| :|.||.||:|||||::| .
 Frog   141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMTPYVVTRYYRAPEVIL-G 199

  Fly   216 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESL 280
            .||.:::|||||||||.||:....:|||..::||.|.::..||:|..:.:: .:....|.|:|:.
 Frog   200 MGYKENVDIWSVGCILGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENR 263

  Fly   281 PFKPNVPWAKLFPN----AD--------ALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDP- 332
            |......:.||||:    ||        :.|.|||.|||..:..|||.|:|||.|||:..:||| 
 Frog   264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPL 328

  Fly   333 -GDEPVAEVPFRINMENDDISRDALKSLIFEETLKFKER 370
             .|.|..::|.: .::..:.:.:..|.||::|.|.:::|
 Frog   329 EADAPPPKIPDK-QLDEREHTIEEWKELIYKEVLDWEDR 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 141/357 (39%)
mapk8XP_012821606.1 STKc_JNK 25..360 CDD:270840 137/343 (40%)

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