DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3347 and mbd1a

DIOPT Version :10

Sequence 1:NP_722887.2 Gene:CG3347 / 33538 FlyBaseID:FBgn0031513 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001296818.1 Gene:mbd1a / 797143 ZFINID:ZDB-GENE-030131-4214 Length:797 Species:Danio rerio


Alignment Length:225 Identity:54/225 - (24%)
Similarity:85/225 - (37%) Gaps:81/225 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 MPAMKVAMGHVGLLLGNDLTNNQKSNKNSEASESKTETKPKVKKPKSE-----------GRKSRY 326
            :||....|..:|..:.:|:.::..|.|.:      .|..|...||..|           ||.:|.
Zfish    21 VPAYLNEMHPIGEDVDSDVEDDDMSCKVT------VELLPDWLKPMEEEEVGVDELMSAGRINRR 79

  Fly   327 RSPSSSLERSPDVSRTAAKRPKLQEELPSSSSRSSRKLVEESRSETERHKAKHKTSKKE------ 385
            ::.    |:.|.|.|...:.||::..|              ||||.::.....:|.||:      
Zfish    80 KTK----EKPPKVKRGRGRPPKIRHGL--------------SRSEFKKGLHADRTMKKKRVGSLM 126

  Fly   386 --KTSSQRAYSLSPIPSPKSYRAARNTSETAPNSPVNLKKTFKQKHVISSPTGKKRVCRSQTISA 448
              |..|::|.|: |.||.|        :|..|.:                   ::||.||.|   
Zfish   127 SRKRLSRKATSV-PDPSLK--------AEVLPRT-------------------RQRVVRSST--- 160

  Fly   449 DDPLPSQPKSTEVSPMASAGTSSS--NKKP 476
                 |.|:||:..|.:.||.:|:  |..|
Zfish   161 -----STPQSTKQVPDSPAGGTSAEFNSPP 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3347NP_722887.2 PHD_SF 23..68 CDD:473978
mbd1aNP_001296818.1 zf-CXXC 373..421 CDD:366873
Blue background indicates that the domain is not in the aligned region.

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