DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3347 and E(bx)

DIOPT Version :10

Sequence 1:NP_722887.2 Gene:CG3347 / 33538 FlyBaseID:FBgn0031513 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster


Alignment Length:251 Identity:57/251 - (22%)
Similarity:86/251 - (34%) Gaps:76/251 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AVSSKDVYCICRQSHING-FMICCDNCNEWFHGDCIGLPANIGEQHDTYYCTECFRKNPLLKCTY 79
            |..::.:||.|||.:... |.||||.|.:||||.|:|:..:..|..|.|.|.||.|||.......
  Fly  2582 ARETQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDANAANM 2646

  Fly    80 KKSPSTTGVPKTPKTPKTPKTPKNPKTPKTPKNSKTPKTARIINSIGVRQNPRRRSTFVQERPSE 144
            ||..|                    ...:..||.             ::|....:|.:       
  Fly  2647 KKLTS--------------------NDVEELKNL-------------IKQMQLHKSAW------- 2671

  Fly   145 VPNPSRQSTKLQKAVNYENATEEPTEDAEKVDQKPKKTAKKKNPKPEDKVTDDAQKPAVEKLFES 209
               |..:....::|.:|....:||. |.::::.|                   .:.....||.|.
  Fly  2672 ---PFMEPVDPKEAPDYYKVIKEPM-DLKRMEIK-------------------LESNTYTKLSEF 2713

  Fly   210 KGTQCNMFRDWSKYVPPENSKKRGTCFTVFCQQLARSCSRYCCDECGNFTAITNVF 265
            .|....:|.:...|.|.|:|          ..:.|.:...|...:..||.  .|||
  Fly  2714 IGDMTKIFDNCRYYNPKESS----------FYKCAEALESYFVQKIKNFR--ENVF 2757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3347NP_722887.2 PHD_SF 23..68 CDD:473978 21/45 (47%)
E(bx)NP_001261188.1 DDT 188..248 CDD:214726
WHIM1 286..330 CDD:464774
PHD1_BPTF 341..383 CDD:277034
WSD 405..>441 CDD:464775
PHD_SF 2533..2579 CDD:473978
PHD2_3_BPTF 2589..2635 CDD:277035 21/45 (47%)
Bromo_gcn5_like 2653..2752 CDD:99941 22/151 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.