DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3347 and Dido1

DIOPT Version :10

Sequence 1:NP_722887.2 Gene:CG3347 / 33538 FlyBaseID:FBgn0031513 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001414237.1 Gene:Dido1 / 362286 RGDID:1311173 Length:2258 Species:Rattus norvegicus


Alignment Length:670 Identity:146/670 - (21%)
Similarity:214/670 - (31%) Gaps:235/670 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VYCICRQSHINGFMICCDNCNEWFHGDCIGLPANIG----EQHDTYYCTECF------------- 69
            :||||||.|.|.||||||.|.|||||||:|:....|    ...:.|.|..|.             
  Rat   266 LYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETSSSAA 330

  Fly    70 ---------------------------------------RKNPLLK------------------- 76
                                                   ..||..|                   
  Rat   331 DEQDAGCRPVGADGTDCTSIGTVEQRSGEDQGIKGRIEKAANPSGKKKLKIFQPVVEAPGAAKCI 395

  Fly    77 ------------------CTYKKSPSTTGVPKTPKTPKTPKTPKNPKTPKTPKNSKTPK---TAR 120
                              |..|.:.:|..:..:.|..| || ||. |....|:....||   .|.
  Rat   396 GPGCSNVAQPDSVYCSNDCILKHAAATMKILSSGKEQK-PK-PKE-KVKMKPEKFSLPKCSVQAG 457

  Fly   121 I-INSI------GVRQNPRRRSTFVQ----------------------------ERPSEVPNPSR 150
            | |:|:      ..|:||.::.|...                            |:|.:...|:.
  Rat   458 IKISSVHKRLASEKRENPVKKVTLASRSETSVKEATCESTPSWASDHNYNAVKPEKPEKPEKPTA 522

  Fly   151 QS-TKLQKAVNYENATEEPTEDAEKVDQK-------------PKKTAKKKNPKPEDKVTDDAQKP 201
            .| |.|.|::..:...|:.|..|..|.:|             |:....||.| |...:.  ..|.
  Rat   523 LSPTLLSKSMKDDKRVEDRTVAAAAVPKKAVPPGSVMGRQTSPRNLVPKKLP-PYPNMA--GAKT 584

  Fly   202 AVEKLFES-KGTQCNMFRDW-SKYVPPENSKKRG-TCFTVFCQQLARSCSRYCCDECGNFTAITN 263
            ||:||... |||...  |.| |..:...::::.| |......::|..|            .|:..
  Rat   585 AVKKLPSGFKGTIPK--RPWPSATLSGTSARQAGPTPVIAASKKLPGS------------AAVVG 635

  Fly   264 VFALGLLPNMPAMKVAMGHVGLLLGNDLTNNQKSNKNSEA------------SESKTETKPKVKK 316
            :....:..|:||.....|.:|.:.......|.:..:|...            |:....|:.:|.|
  Rat   636 IARKPMSANVPAASPVPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGK 700

  Fly   317 -------------PKSEGR-KSRYRSPSSSLERSP------------DVSRTAAKRPKLQEELPS 355
                         ..::.| ||:|||...:| :.|            ::|.....|.| .|||.|
  Rat   701 IALHIEKEMFNLFQVTDNRYKSKYRSIMFNL-KDPKNQGLFHRVLREEISLAKLVRMK-PEELVS 763

  Fly   356 SS----SRSSRKLVEESRSETERHKAKHKTSKKEKTSSQRAYSLSPIPSPKSYRAARNTSETAPN 416
            ..    :....|.|.|||::......|:.|..:.....:.:..:|.....:|.|||...| |||.
  Rat   764 KELSMWTEKPTKSVIESRTKLLNESKKNSTKPETIPDMEDSPPVSDSEEQESVRAAPEKS-TAPL 827

  Fly   417 SPV---NLKKTFKQ--KHVISSPTGKKRVCRSQTISA-DDPLPSQPKSTEVS------------- 462
            ..|   .||.|..|  .|:...   ..::|..|..|: |:|.|.:.|.:..|             
  Rat   828 LDVFSSMLKDTTSQHRAHLFDL---NCKICTGQVPSSEDEPAPKKQKLSASSKKEDLKARHDSSP 889

  Fly   463 PMASAGTSSSNKKPVPETSC 482
            |.|...|:.......||.:|
  Rat   890 PDAVPSTADEGIAETPENTC 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3347NP_722887.2 PHD_SF 23..68 CDD:473978 26/48 (54%)
Dido1NP_001414237.1 None

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