DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3347 and CG17440

DIOPT Version :10

Sequence 1:NP_722887.2 Gene:CG3347 / 33538 FlyBaseID:FBgn0031513 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_572555.1 Gene:CG17440 / 31879 FlyBaseID:FBgn0030120 Length:366 Species:Drosophila melanogaster


Alignment Length:376 Identity:89/376 - (23%)
Similarity:144/376 - (38%) Gaps:98/376 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TAVSSKD-VYCICRQSHINGFMICCDNCNEWFHGDCIGLPANIGEQHDTYYCTECFRKNPLLKCT 78
            |.:..|| .|||||.|..:.|||.||.|.||:|||||.:.....|....|||..|.::||.|:..
  Fly    31 TILKQKDREYCICRSSDCSRFMIGCDGCEEWYHGDCIEITEKDAEHIKNYYCRRCKKENPELQTI 95

  Fly    79 YK----------KSPSTT----GVPKTPKTPKTPKTPKNPKTPKTPKNSKTPKTARIINSIGVRQ 129
            ::          .:.||:    ||..:...|..  .|..|.|  |.:.:..|.||.         
  Fly    96 FRLVATERAAASNAASTSLNAPGVGPSGAAPAA--APVAPAT--TSQQAPPPTTAA--------- 147

  Fly   130 NPRRRSTFVQERPSEVPNPSRQSTKLQKAVNYENATEEPTEDAEKVDQKPKKTAKKKNPKPEDKV 194
             .:|:::..|| |.| ..|::..||..||.                   ||.:..:.:|:     
  Fly   148 -AKRKNSSAQE-PKE-SQPTQAGTKRDKAA-------------------PKTSNVQVSPR----- 185

  Fly   195 TDDAQKPAVEKLFESKGTQCNMFRDWSKYVPPENSKKRGTCFTVFCQQLARSCSRYCCDECGNFT 259
               |..|.:....|.:|.|                    .|....|...||..|:||.||||:..
  Fly   186 ---AVSPEIFLNPELQGIQ--------------------QCHGPNCCSHARPQSKYCSDECGSNL 227

  Fly   260 AITNVFAL--------GLLPNMPAMKVAMGHVGLLLGNDLTNNQKSNKNSEASESKTETKPKVKK 316
            ||..:|.:        .:.|:..|.:... |:.|.:...:...|:..:..|....:.:|:.|..:
  Fly   228 AIERLFQILPQQMQEWNITPSRAAEETRK-HLELNMDELVLKQQEQLEEFEKQRQQIQTQQKQYQ 291

  Fly   317 PKSEGRKSRYRSPSSSLERSPDVSRTAAKRPKLQEELPSSSSRSSRKLVEE 367
            .|.:          ..|::.|. .:...:..:.|:||.....:..::|:::
  Fly   292 EKQK----------LMLQQQPQ-QQQQQQELQQQQELQQQQEQEQQQLLQQ 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3347NP_722887.2 PHD_SF 23..68 CDD:473978 23/44 (52%)
CG17440NP_572555.1 PHD_Cfp1 40..85 CDD:277028 23/44 (52%)
CpG_bind_C 228..>278 CDD:463514 8/50 (16%)

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