DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3347 and Cxxc1

DIOPT Version :10

Sequence 1:NP_722887.2 Gene:CG3347 / 33538 FlyBaseID:FBgn0031513 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_038952569.1 Gene:Cxxc1 / 291440 RGDID:1310755 Length:702 Species:Rattus norvegicus


Alignment Length:466 Identity:111/466 - (23%)
Similarity:177/466 - (37%) Gaps:90/466 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VYCICRQSHINGFMICCDNCNEWFHGDCIGLPANIGEQHDTYYCTECFRKNPLLKCTY--KKSPS 84
            :|||||:..||.|||.|||||||||||||.:...:.:....:||.||..|:|.|:..|  ||...
  Rat    27 IYCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEIRYRHKKCRE 91

  Fly    85 TTGVPKTPKTPKTP----KTPKNPKTPKTPKNSKTPKTARIINSIGVRQNPRRRSTFVQERPSE- 144
            ..|..:....|:..    |.|.:....:....|.|...|.:...   ..:|.:.|      |.. 
  Rat    92 RDGSERDGSEPRDEGGGRKRPASDPELQRRAGSGTGVGAMLARG---SASPHKSS------PQPL 147

  Fly   145 VPNPSRQSTKLQKAVNYENATEEPTEDAEKVDQKPKKTAKKKNPKPEDKVTDDAQKPAVEKLFES 209
            |..||:...:.|:               ::..|:.|::|:........:.|:|.           
  Rat   148 VATPSQHHQQQQQ---------------QQQQQQIKRSARMCGECEACRRTEDC----------- 186

  Fly   210 KGTQCNMFRDWSKYVPPENSKKRGTCFTVFCQQLARSCSRYCCDECGNF-TAITNVFALGLLP-- 271
              ..|:..||..|:..|  :|.|..|....||..||...:|       | ::::.|.....||  
  Rat   187 --GHCDFCRDMKKFGGP--NKIRQKCRLRQCQLRARESYKY-------FPSSLSPVTPSEALPRP 240

  Fly   272 -------NMPAMKVAMGHV----GLLLGNDLTNNQKSNKNSE-ASESKTETKPKVKKPKSEGRKS 324
                   ..|.....:|.:    |.:|.:.:....::....| .|:......|.:.:....|...
  Rat   241 RRPPPTQQQPQQSQKLGRIREDEGTVLSSVVKEPPEATATPEPLSDEDLALDPDLYQDFCAGAFD 305

  Fly   325 RYRSPSSSLERSPDVSRTAAKRPKLQEELPSSSSRSSRKLVE--ESRSETERHKAKHKTSKK--E 385
            .:....|..|.||.:.....||....:.:.....:|.:|::|  |.|.:..|.|.|||...|  |
  Rat   306 DHVPWMSDAEESPFLDPALRKRAVKVKHVKRREKKSEKKVMERKEERYKRHRQKQKHKDKWKHPE 370

  Fly   386 KTSSQRAYSLSPIPSPKSYRAARNTSETAPNS--------------PVNLKKTFKQKHVISSPTG 436
            :..::...||.....|...|||:..|:...:.              |..::: ::|...|:...|
  Rat   371 RADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRIQQ-WQQSPCIAEEHG 434

  Fly   437 KK---RVCRSQ 444
            ||   |:.|.|
  Rat   435 KKLLERIRREQ 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3347NP_722887.2 PHD_SF 23..68 CDD:473978 25/44 (57%)
Cxxc1XP_038952569.1 PHD_Cfp1 28..73 CDD:277028 25/44 (57%)
zf-CXXC 167..213 CDD:366873 12/60 (20%)
CpG_bind_C 408..>566 CDD:463514 9/39 (23%)

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