DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34393 and rasgef1a

DIOPT Version :10

Sequence 1:NP_608753.2 Gene:CG34393 / 33534 FlyBaseID:FBgn0085422 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_012822158.1 Gene:rasgef1a / 734010 XenbaseID:XB-GENE-5739365 Length:485 Species:Xenopus tropicalis


Alignment Length:557 Identity:136/557 - (24%)
Similarity:216/557 - (38%) Gaps:159/557 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 SVLGS--------------GGIMYINGRIVSGPLDSLIETLLPKDVVDLDKEFVFSFLLSCRLFL 227
            |:|||              |..:|.:|.:|||.|:.|||.|:|......||.::|:||||.|:|:
 Frog    19 SMLGSTCSGQVQPEMGEHCGDPVYQDGSLVSGSLEVLIERLVPTLDYYPDKTYIFTFLLSARIFI 83

  Fly   228 RPHELLGRL----------LDSVPESECLE------SLVSLLAEWTMKFPYDYRDERMMSHVKHI 276
            .|:|:|.::          |:|..|::..:      .::.||.|||..||:|::|||....:|.|
 Frog    84 HPYEILAKVGQMCIKQKQQLESGSEADKAKLKSFAAKIIQLLREWTETFPFDFQDERARKEMKEI 148

  Fly   277 VARCS-----NSHLEAAVSQTLSALLKRLT---DLERHEADLR--------ACQTNDKSGPETPL 325
            ..|.:     |..::.::||....:|..|:   ..:.....:|        ..:|..:|..:..|
 Frog   149 AQRITQCDEENGTIKKSISQMTQNVLVVLSTRGQFQEVREKIRQPVSDKGTILKTKPQSAQKDIL 213

  Fly   326 N-CPTATQYAQIVCRVEKKLAKHIGGEEFLQ-CSSMILLDKQKKWDQPSTSGAPPGAQDPKKTCN 388
            : |......||.:..:|.:...:|..|:.:| .|.|..||..|            ...|..||.|
 Frog   214 SVCSDPLILAQQLTTIELERLGNIFPEDLMQIISHMDSLDNHK------------CRSDVTKTYN 266

  Fly   389 LETYLDWSARLRLFVCNEILQSVGIEGRSRTVELWSGVAQYCLLVGNYNSATAILESLESPAIAR 453
            ||.|.:|...|.:.|..||.:.|..:.|:|.:|.:..||:.|..:||:||..||:..:....:||
 Frog   267 LEAYDNWFNCLSMLVATEICKVVKKKQRTRVMEFFIDVARECFNIGNFNSMMAIISGMNLSPVAR 331

  Fly   454 LKITWSKLQVTCQQLDCMQRHAEGHGHLWQKQAISLNEQQEGLKTDKQAPKEPAAQGAAPTQGAV 518
            ||.||||::..  :.|.::.|.:                                          
 Frog   332 LKKTWSKVKTA--KFDVLEHHMD------------------------------------------ 352

  Fly   519 AIAITTSSDSDEKPSTSGRVAGIAGISAATMESAPVPVASGSNVDAATAAAARTSTTAATTPLAS 583
                                                |.::..|.        ||:...||....|
 Frog   353 ------------------------------------PSSNFCNY--------RTALQGATQRSQS 373

  Fly   584 SGKPNDWVVIPVFADIVKLALGERENCLQRLANGHINMAAFDRMAAIVGAFTKHMQAMKAAQAPS 648
            :....:.:|||||...:|......:....||.|||||...|..::..:..|.    ..|..:.| 
 Frog   374 ANSSREKIVIPVFNLFIKDIFFLHKIHSNRLPNGHINFKKFWEISRQIHDFL----TWKQVECP- 433

  Fly   649 SGEYE---HFCRHMQQTTKLGEAELMMASFDCEEPNN 682
               ||   ....::..|....|..|.:|||:.|.|:|
 Frog   434 ---YEKDKKIQTYLLTTPIYTEEALFLASFENEGPDN 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34393NP_608753.2 REM 196..300 CDD:100121 39/124 (31%)
RasGEF 334..>473 CDD:459872 45/139 (32%)
rasgef1aXP_012822158.1 REM 51..168 CDD:100121 36/116 (31%)
RasGEF 222..415 CDD:459872 66/292 (23%)

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