DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34393 and rasgef1b

DIOPT Version :10

Sequence 1:NP_608753.2 Gene:CG34393 / 33534 FlyBaseID:FBgn0085422 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_031756070.1 Gene:rasgef1b / 549667 XenbaseID:XB-GENE-1015760 Length:588 Species:Xenopus tropicalis


Alignment Length:575 Identity:143/575 - (24%)
Similarity:228/575 - (39%) Gaps:149/575 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 PKNEDLVQYD-----VPKNPHKRSQCDIN------FESSVLGSGGIMYINGRIVSGPLDSLIETL 203
            |..:.|  ||     :|:.|...:..|.:      ::|.......:.|.:..::||.|::||:.|
 Frog   103 PSEKSL--YDPVLERMPQTPTLVAMFDSSSFHRNLYQSKEESCSELYYQDNNLLSGSLEALIQHL 165

  Fly   204 LPKDVVDL--DKEFVFSFLLSCRLFLRPHELLGRL--------------LDSVPESECLESLVSL 252
            :|.  ||.  |:.::|:||||.|||:.|.||:.|:              ||.....:....::.|
 Frog   166 VPN--VDYYPDRTYIFTFLLSSRLFIHPSELMARVCHVCMEQQRLNEPGLDKSQVRKIAPKILQL 228

  Fly   253 LAEWTMKFPYDYRDERMMSHVKHIVARCSNSH--LEAAVSQTLSALLKRLTDLERHEADLRA--C 313
            |.|||..||||:||||||.::|....|.:|..  ....|.|.:..|:::|..|.::|..:..  .
 Frog   229 LTEWTETFPYDFRDERMMRNLKDTAHRITNGDEMYRKNVQQIIQNLIRKLASLTQYEELITKINA 293

  Fly   314 QTND-----KSGPETPLN-----CPTATQYAQIVCRVEKKLAKHIGGEEFLQCSSMILLDKQKKW 368
            |:.|     |:.|::...     |......||.:..:|.:...:||.|||:|  :.:..|.....
 Frog   294 QSTDRMTVLKTKPQSIQRDIITVCSDPYTVAQQLTHIELERLSYIGPEEFVQ--AFVQKDPLDNN 356

  Fly   369 DQPSTSGAPPGAQDPKKTCNLETYLDWSARLRLFVCNEILQSVGIEGRSRTVELWSGVAQYCLLV 433
            :|...|       |.||..|||.|::|..||...|..||...|..:.|:|.:|.:..||:.|..:
 Frog   357 EQNCYS-------DRKKPRNLEAYVEWFNRLSYLVATEICMPVKKKHRARMIEFFIDVARECFNI 414

  Fly   434 GNYNSATAILESLESPAIARLKITWSKLQVTCQQLDCMQRHAEGHGHLWQKQAISLNEQQEGLKT 498
            ||:||..||:..:....::|||.||:|::..  :.|.::...:                      
 Frog   415 GNFNSLMAIISGMNMSPVSRLKKTWAKVKTA--KFDILEHQMD---------------------- 455

  Fly   499 DKQAPKEPAAQGAAPTQGAVAIAITTSSDSDEKPSTSGRVAGIAGISAATMESAPVPVASGSNVD 563
                                                                    |.::..|..
 Frog   456 --------------------------------------------------------PSSNFYNYR 464

  Fly   564 AATAAAARTSTTAATTPLASSGKPNDWVVIPVFADIVKLALGERENCLQRLANGHINMAAFDRMA 628
            .|...||:.|.||.:.        .:.:|||..:.::|......|.|..||.|||:|...|..:|
 Frog   465 TALRGAAQRSLTAHSN--------REKIVIPFCSLLIKDIYFLNEGCTSRLPNGHVNFEKFWELA 521

  Fly   629 AIVGAFTKHMQAMKAAQAPSSGEYEHFCRHMQQTTKL-GEAELMMASFDCEEPNN 682
            ..|..|    ...|..:.|.  |.:....|...|..: .|..|.:||::.|.|.|
 Frog   522 KQVSEF----MTWKQVECPF--EKDRKILHYVLTAPIFSEDALYLASYESEGPEN 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34393NP_608753.2 REM 196..300 CDD:100121 43/121 (36%)
RasGEF 334..>473 CDD:459872 45/138 (33%)
rasgef1bXP_031756070.1 REM 157..281 CDD:100121 44/125 (35%)
RasGEF 323..518 CDD:459872 65/291 (22%)

Return to query results.
Submit another query.