DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34393 and Rgl

DIOPT Version :10

Sequence 1:NP_608753.2 Gene:CG34393 / 33534 FlyBaseID:FBgn0085422 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster


Alignment Length:575 Identity:102/575 - (17%)
Similarity:175/575 - (30%) Gaps:216/575 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QKSRGQRDRDKCHHGHHQHHRRHHRRRCRISSNSSSTDSESADECGLELGESGADSREAGAGGGA 89
            |:.:.|:.:|......|.||....|:|     ..|.|..|....|..........||.|.|    
  Fly    73 QRQQQQQQQDAKDSKRHYHHHTCPRQR-----KKSMTPVEPTHLCQKHQEAKQRRSRSASA---- 128

  Fly    90 GLQVAQGGIFSLDPGHLTAETALLGGNIRYRRRHSAEQLSAYDLEMGFQQLE------------- 141
                                        :.||..|.......|:.......|             
  Fly   129 ----------------------------KPRRNSSYHSYDDLDVSSAVLNAERKVVASLKYLCAC 165

  Fly   142 LGTTI-SVGPKNEDL-------------------------------VQYDVPKNPHKRSQCD--- 171
            .|.|: ::..|.:||                               |:|..| .|...:..|   
  Fly   166 TGATLRNLSKKTKDLHAKNYTYTKPTWRLWGEEHEKNAIFTVYLKKVRYHRP-TPTASNDSDDEI 229

  Fly   172 --INFESSVLGSGGIMYINGRIV-SGPLDSLIETLLPKDVVDLDKEFVFSFLLSCRLFLRPHELL 233
              :.:|:          :..|.| :..|..|:|.|...| .:|:..|:..||.:.|.|..|.::|
  Fly   230 SHLEWET----------VRVRFVKAATLARLVEALATDD-GELESTFINVFLSTYRTFSTPKQVL 283

  Fly   234 ------------------------GRLLD-------SVPESECLESLVSLLAEWTMKFPYDYRDE 267
                                    |:::|       |:.|.. .::|||.|..|...||.|:.::
  Fly   284 SLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQH-KKTLVSALHVWLDGFPEDWHED 347

  Fly   268 RMMSHVKHIVARCSNSHLEAAVSQTLSALLKRL----------TDLERHE--ADLRACQ------ 314
            .:...:.....|...|.|...|...|..|:|:.          ::...|.  :..|:.|      
  Fly   348 NLQQILAFATKRLKRSDLHIKVLNRLERLIKQSLYGNGGGSGGSENNGHSWLSAARSQQMQQFMI 412

  Fly   315 ----------TNDKSG------------------------PETPLNCPTATQYAQIVCRVE---- 341
                      |:..:|                        |..|:.     .:|:.:.|::    
  Fly   413 PTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPTHFLQAFRFPHVPVR-----HFAEQLTRMDTELF 472

  Fly   342 KKLAKHIGGEEFLQCSSMILLDKQKKWDQPSTSGAPPGAQDPKKTCNLETYLDWSARLRLFVCNE 406
            |:|..|       ||..       ..|.:..:.|:        :|. :.|...::|.|...|.:.
  Fly   473 KRLIPH-------QCLG-------HTWARRDSGGS--------ETV-VATINQFNAVLFRVVSSI 514

  Fly   407 ILQSVGIEGRSRTVELWSGVAQYCLLVGNYNSATAILESLESPAIARLKITWSKL 461
            ::..:..:.|:..:..|..:||...::.|::|..||:.:|.|.:|.||...|..|
  Fly   515 LIDRLKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSKIWEVL 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34393NP_608753.2 REM 196..300 CDD:100121 32/134 (24%)
RasGEF 334..>473 CDD:459872 29/132 (22%)
RglNP_001261814.1 REM 246..378 CDD:100121 31/133 (23%)
RasGEF 454..719 CDD:214539 30/144 (21%)
RA_RalGDS_like 858..946 CDD:340449
Blue background indicates that the domain is not in the aligned region.

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