DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34393 and Sos

DIOPT Version :10

Sequence 1:NP_608753.2 Gene:CG34393 / 33534 FlyBaseID:FBgn0085422 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_476597.2 Gene:Sos / 34790 FlyBaseID:FBgn0001965 Length:1596 Species:Drosophila melanogaster


Alignment Length:622 Identity:111/622 - (17%)
Similarity:213/622 - (34%) Gaps:204/622 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 TISVGPKNEDLVQYDVP-KNPHKRSQCDINFESSVLGSGGIMYINGR-------IVSGPLDSLIE 201
            |.|:..::.|.:..|:. |:|.:....:| ::.:|..||..:.:..|       |....|..|||
  Fly   588 TKSMLDRHLDSILQDIERKHPLRMPSPEI-YKFAVPDSGDNIVLEERESAGVPMIKGATLCKLIE 651

  Fly   202 TLLPKDVVDLDKEFVFSFLLSCRLFLRPHELLGRLLD--SVPESECLES---------------- 248
            .|...  :..|..||.:||.:.|.|..|.:||..|::  ::|:...:..                
  Fly   652 RLTYH--IYADPTFVRTFLTTYRYFCSPQQLLQLLVERFNIPDPSLVYQDTGTAGAGGMGGVGGD 714

  Fly   249 -------------------------LVSLLAEWTMKFPYDYRD-----ERMMSHVKHIVARCSNS 283
                                     ::::|..|.....||:..     |::::.::|:..:....
  Fly   715 KEHKNSHREDWKRYRKEYVQPVQFRVLNVLRHWVDHHFYDFEKDPMLLEKLLNFLEHVNGKSMRK 779

  Fly   284 HLEAAVSQTLSALLKRLTDLERHEADLRACQTNDKSGPETPLNCPT---------ATQYAQIVCR 339
            .:::.:.     :::|..:.|:....:.....:|....|..|:.|.         ..:.|:.:..
  Fly   780 WVDSVLK-----IVQRKNEQEKSNKKIVYAYGHDPPPIEHHLSVPNDEITLLTLHPLELARQLTL 839

  Fly   340 VEKKLAKHIGGEEFLQCSSMILLDKQKKWDQPSTSGAPPGAQDPK-KTCNLETYLDWSARLRLFV 403
            :|.::.|::...|.:                    |:|...:|.: |:.||...:..:..:..::
  Fly   840 LEFEMYKNVKPSELV--------------------GSPWTKKDKEVKSPNLLKIMKHTTNVTRWI 884

  Fly   404 CNEILQSVGIEGRSRTVELWSGVAQYCLLVGNYNSATAILESLESPAIARLKIT-------WSKL 461
            ...|.::...|.|...::....|....|.:.|:|...:|:.::.:.::.||:.|       :.|.
  Fly   885 EKSITEAENYEERLAIMQRAIEVMMVMLELNNFNGILSIVAAMGTASVYRLRWTFQGLPERYRKF 949

  Fly   462 QVTCQQL--DCMQRHAE------------------------------------------------ 476
            ...|::|  |.::::.|                                                
  Fly   950 LEECRELSDDHLKKYQERLRSINPPCVPFFGRYLTNILHLEEGNPDLLANTELINFSKRRKVAEI 1014

  Fly   477 -GHGHLWQKQAISLNEQQ------------EGLKTDKQ-------------------APKEP--- 506
             |....:|.|...|||:.            .|| :|||                   .||.|   
  Fly  1015 IGEIQQYQNQPYCLNEESTIRQFFEQLDPFNGL-SDKQMSDYLYNESLRIEPRGCKTVPKFPRKW 1078

  Fly   507 -----AAQGAAPTQGAVAIAITTSSDSDEKPSTSGRVAGIAGISAAT-MESAPVPVASGSNV-DA 564
                 .:.|..|.:     ...|:|.|....|||...|..|..|.|| :.:|..|....|:: ||
  Fly  1079 PHIPLKSPGIKPRR-----QNQTNSSSKLSNSTSSVAAAAAASSTATSIATASAPSLHASSIMDA 1138

  Fly   565 ATAAAARTSTTAATTPLASSGKP-NDWVVIPVFADIV 600
            .|||||    .|.:..||....| ::.....|||.::
  Fly  1139 PTAAAA----NAGSGTLAGEQSPQHNPHAFSVFAPVI 1171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34393NP_608753.2 REM 196..300 CDD:100121 23/151 (15%)
RasGEF 334..>473 CDD:459872 25/148 (17%)
SosNP_476597.2 HFD_SOS1_rpt1 68..145 CDD:467039
HFD_SOS1_rpt2 153..227 CDD:467040
RhoGEF 249..432 CDD:238091
PH_SOS 476..586 CDD:269963
RasGEFN 637..791 CDD:214571 24/160 (15%)
RasGEF 825..1062 CDD:238087 37/257 (14%)
PHA03247 <1197..1502 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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