DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34393 and Rasgef1b

DIOPT Version :9

Sequence 1:NP_001285578.1 Gene:CG34393 / 33534 FlyBaseID:FBgn0085422 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_665838.1 Gene:Rasgef1b / 320292 MGIID:2443755 Length:473 Species:Mus musculus


Alignment Length:565 Identity:141/565 - (24%)
Similarity:233/565 - (41%) Gaps:145/565 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 VPKNPHKRSQCDIN------FESSVLGSGGIMYINGRIVSGPLDSLIETLLPKDVVDL--DKEFV 216
            :|:.|...:..|.:      ::|:....||:.|.:..::||.|::||:.|:|.  ||.  |:.::
Mouse     1 MPQTPPFSAMFDSSGYNRNLYQSAEDSCGGLYYHDNNLLSGSLEALIQHLVPN--VDYYPDRTYI 63

  Fly   217 FSFLLSCRLFLRPHELLGRLLDSVPESECLE--------------SLVSLLAEWTMKFPYDYRDE 267
            |:||||.|||:.|:||:.::.....|.:.|.              .::.||.|||..||||:|||
Mouse    64 FTFLLSSRLFMHPYELMAKVCHLCVEHQRLSEGDGDKNQMRKIAPKILQLLTEWTETFPYDFRDE 128

  Fly   268 RMMSHVKHIVARCSNSHLEA---AVSQTLSALLKRLTDLERHE---ADLRACQTND----KSGPE 322
            |||.::|.:..|.::...:.   .|.|.:..|:::|..|.::|   |.|.:..|:.    |:.|:
Mouse   129 RMMRNLKDLAHRMASGEEQTYRKNVQQMMQCLIRKLAALSQYEEVLAKLSSTATDRLTVLKTKPQ 193

  Fly   323 TPLN-----CPTATQYAQIVCRVEKKLAKHIGGEEFLQC-SSMILLDKQKKWDQPSTSGAPPGAQ 381
            :...     |......||.:..:|.:...:||.|||:|. .....||..|..           ..
Mouse   194 SIQRDIMTVCSDPYTLAQQLTHIELERLNYIGPEEFVQAFVQKDPLDNDKSC-----------YS 247

  Fly   382 DPKKTCNLETYLDWSARLRLFVCNEILQSVGIEGRSRTVELWSGVAQYCLLVGNYNSATAILESL 446
            :.|||.|||.|::|..||...|..||...|..:.|:|.:|.:..||:.|..:||:||..||:..:
Mouse   248 ERKKTRNLEAYVEWFNRLSYLVATEICMPVKKKHRARMIEYFIDVARECFNIGNFNSLMAIISGM 312

  Fly   447 ESPAIARLKITWSKLQVTCQQLDCMQRHAEGHGHLWQKQAISLNEQQEGLKTDKQAPKEPAAQGA 511
            ....::|||.||:|::..  :.|.::...:                                   
Mouse   313 NMSPVSRLKKTWAKVKTA--KFDILEHQMD----------------------------------- 340

  Fly   512 APTQGAVAIAITTSSDSDEKPSTSGRVAGIAGISAATMESAPVPVASGSNVDAATAAAARTSTTA 576
                                                       |.::..|...|...||:.|.||
Mouse   341 -------------------------------------------PSSNFYNYRTALRGAAQRSLTA 362

  Fly   577 ATTPLASSGKPNDWVVIPVFADIVKLALGERENCLQRLANGHINMAAFDRMAAIVGAFTKHMQAM 641
            .::        .:.:|||.|:.::|......|.|:.||.|||:|...|..:|..|..|    ...
Mouse   363 HSS--------REKIVIPFFSLLIKDIYFLNEGCVNRLPNGHVNFEKFWELAKQVSEF----MTW 415

  Fly   642 KAAQAPSSGEYEHFCRHMQQTTKLGEAELMMASFDCEEP-NNAEK 685
            |..:.|...: ....:::.......|..|.:||::.|.| ||.||
Mouse   416 KQVECPFERD-RKVLQYLLSVPVFSEDALYLASYESEGPENNIEK 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34393NP_001285578.1 REM 196..300 CDD:100121 41/122 (34%)
RasGEF 334..>473 CDD:279011 45/139 (32%)
Rasgef1bNP_665838.1 REM 42..167 CDD:100121 42/126 (33%)
RasGEF 209..403 CDD:366198 66/292 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3541
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3112
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.820

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