DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34393 and R05G6.10

DIOPT Version :9

Sequence 1:NP_001285578.1 Gene:CG34393 / 33534 FlyBaseID:FBgn0085422 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001294201.1 Gene:R05G6.10 / 177527 WormBaseID:WBGene00019902 Length:547 Species:Caenorhabditis elegans


Alignment Length:560 Identity:112/560 - (20%)
Similarity:209/560 - (37%) Gaps:164/560 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 HKRSQCDINFESSVLGSGGIMYINGRIVSGPLDSLIETLLPKDVVDLDKEFVFSFLLSCRLFLRP 229
            ||..    .||.:.|    ::...|.::||..|:||..|:|......|:.::||.|::.|.|:.|
 Worm   102 HKSD----TFEQNDL----VLDNTGAVLSGSRDALIRRLVPTRDFCPDESYIFSLLVNIRTFISP 158

  Fly   230 HELLGRLLDSVPESECLES--------------LVSLLAEWTMKFPYDYRDERMMSHVKHIVARC 280
            |||:.:::.....::..:|              ::.|.:||....|||::.|.|.:.:..::..|
 Worm   159 HELMQKIVQYCMFAQNADSHNFAKEGRGRMFAHILRLCSEWATNIPYDFKTEYMRTRLNELLRLC 223

  Fly   281 S-NSHLEAAVSQTLSALLKRLTDLERHE---ADLRACQTNDKSGPETP-------LNCPTATQYA 334
            : :...:...::..|.|...|..|:|:|   |:|:...:.:.:.||..       :.|..|...|
 Worm   224 AVDKTYQQKTTELQSTLRSSLNKLDRYEKAVANLQKALSENTNLPEQSDSMTGLFVLCNDAKTVA 288

  Fly   335 QIVCRVEKKLAKHIGGEEFLQ---CSSMILLDKQKKWDQPSTSGAPPGAQDPKKTCNLETYLDWS 396
            |.:..:|.:....:|.:|.:|   ...:..:.:..|..:.:.|             ::..|::|.
 Worm   289 QQLTHIEMERFSMVGVDEIVQSLASDPLSEIGRHSKNKEGTIS-------------SISFYIEWF 340

  Fly   397 ARLRLFVCNEILQSVGIEGRSRTVELWSGVAQYCLLVGNYNSATAILESLESPAIARLKITWSKL 461
            .||..|...|:|:......|....|....:|:.|..:||:||..||:..|..||::|||.||.::
 Worm   341 NRLSAFAAIEVLKQTKKRNRVAVFEFMIDIAKECCEIGNFNSMMAIVAGLSLPAVSRLKKTWCRV 405

  Fly   462 QVTCQQLDCMQRHAEGHGHLWQKQAISLNEQQEGLKTDKQAPKEPAAQGAAPTQGAVAIAITTSS 526
            :..  :|:.:|...:..|:....:|                                        
 Worm   406 EKA--KLEILQHQLDPSGNFLSYRA---------------------------------------- 428

  Fly   527 DSDEKPSTSGRVAGIAGISAATMESAPVPVASGSNVDAATAAAARTSTTAATTPLASSGKPNDW- 590
                                                           |..|....|.|.:.|.. 
 Worm   429 -----------------------------------------------TIKAAQWRADSARGNQQK 446

  Fly   591 VVIPVFADIVKLALGERENCLQRLANGHINMAAFDRMA----------AIVGAFTKHMQAMKAAQ 645
            :|||.|..::|..........:.|.|.|:|..||:::|          :.|..|.|:.|.:    
 Worm   447 IVIPFFVLLLKDLFLIYHGHPRILPNAHLNFMAFNQLAEQLRDVIQWKSTVCTFEKNPQVL---- 507

  Fly   646 APSSGEYEHFCRHMQQTTKLGEAELMMASFDCEEPNNAEK 685
                       :::..|:..||.:.|:.||:||.|.::.:
 Worm   508 -----------QYLLITSVSGEKDSMLMSFECEPPESSSE 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34393NP_001285578.1 REM 196..300 CDD:100121 27/118 (23%)
RasGEF 334..>473 CDD:279011 34/141 (24%)
R05G6.10NP_001294201.1 RasGEFN 116..242 CDD:214571 30/125 (24%)
RasGEF 279..532 CDD:214539 68/369 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3541
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3112
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D246323at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.870

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