DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34393 and Rasgef1b

DIOPT Version :10

Sequence 1:NP_608753.2 Gene:CG34393 / 33534 FlyBaseID:FBgn0085422 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_017454918.1 Gene:Rasgef1b / 100361238 RGDID:1562220 Length:480 Species:Rattus norvegicus


Alignment Length:565 Identity:141/565 - (24%)
Similarity:232/565 - (41%) Gaps:145/565 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 VPKNPHKRSQCDIN------FESSVLGSGGIMYINGRIVSGPLDSLIETLLPKDVVDL--DKEFV 216
            :|:.|...:..|.:      ::.|....||:.|.:..::||.|::||:.|:|.  ||.  |:.::
  Rat     8 MPQTPPFSAMFDSSGYNRNVYQPSEDSCGGLNYHDNNLLSGSLEALIQHLVPN--VDYYPDRTYI 70

  Fly   217 FSFLLSCRLFLRPHELLGRLLDSVPESECLE--------------SLVSLLAEWTMKFPYDYRDE 267
            |:||||.|||:.|:||:.::.....|.:.|.              .::.||.|||..||||:|||
  Rat    71 FTFLLSSRLFMHPYELMAKVCHLCIEHQRLSEGDGDKNQTRKIAPKILQLLTEWTETFPYDFRDE 135

  Fly   268 RMMSHVKHIVARCSNSHLEA---AVSQTLSALLKRLTDLERHE---ADLRACQTND----KSGPE 322
            |||.::|.:..|.::...:.   .|.|.:..|:::|..|.::|   |.|.:..|:.    |:.|:
  Rat   136 RMMRNLKDLAHRMASGEEQTYRKNVQQMMQCLIRKLAALSQYEEVLAKLSSTATDRLTVLKAKPQ 200

  Fly   323 TPLN-----CPTATQYAQIVCRVEKKLAKHIGGEEFLQC-SSMILLDKQKKWDQPSTSGAPPGAQ 381
            :...     |......||.:..:|.:...:||.|||:|. .....||..|..           ..
  Rat   201 SIQRDIMTVCSDPYTLAQQLTHIELERLNYIGPEEFVQAFVQKDPLDNDKNC-----------YS 254

  Fly   382 DPKKTCNLETYLDWSARLRLFVCNEILQSVGIEGRSRTVELWSGVAQYCLLVGNYNSATAILESL 446
            :.|||.|||.|::|..||...|..||...|..:.|:|.:|.:..||:.|..:||:||..||:..:
  Rat   255 ERKKTRNLEAYVEWFNRLSYLVATEICMPVKKKHRARMIEYFIDVARECFNIGNFNSLMAIISGM 319

  Fly   447 ESPAIARLKITWSKLQVTCQQLDCMQRHAEGHGHLWQKQAISLNEQQEGLKTDKQAPKEPAAQGA 511
            ....::|||.||:|::..  :.|.::...:                                   
  Rat   320 NMSPVSRLKKTWAKVKTA--KFDILEHQMD----------------------------------- 347

  Fly   512 APTQGAVAIAITTSSDSDEKPSTSGRVAGIAGISAATMESAPVPVASGSNVDAATAAAARTSTTA 576
                                                       |.::..|...|...||:.|.||
  Rat   348 -------------------------------------------PSSNFLNYRTALRGAAQRSLTA 369

  Fly   577 ATTPLASSGKPNDWVVIPVFADIVKLALGERENCLQRLANGHINMAAFDRMAAIVGAFTKHMQAM 641
            .::        .:.:|||.|:.::|......|.|:.||.|||:|...|..:|..|..|    ...
  Rat   370 HSS--------REKIVIPFFSLLIKDIYFLNEGCVNRLPNGHVNFEKFWELAKQVSEF----MTW 422

  Fly   642 KAAQAPSSGEYEHFCRHMQQTTKLGEAELMMASFDCEEP-NNAEK 685
            |..:.|...: ....:::.......|..|.:||::.|.| ||.||
  Rat   423 KQVECPFERD-RKVLQYLLSVPVFSEDALYLASYESEGPENNIEK 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34393NP_608753.2 REM 196..300 CDD:100121 41/122 (34%)
RasGEF 334..>473 CDD:459872 45/139 (32%)
Rasgef1bXP_017454918.1 REM 49..174 CDD:100121 42/126 (33%)
RasGEF 216..410 CDD:459872 66/292 (23%)

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