DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ccdc85 and Ccdc85c

DIOPT Version :10

Sequence 1:NP_608734.2 Gene:Ccdc85 / 33509 FlyBaseID:FBgn0031488 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001420170.1 Gene:Ccdc85c / 690965 RGDID:1589818 Length:433 Species:Rattus norvegicus


Alignment Length:456 Identity:152/456 - (33%)
Similarity:223/456 - (48%) Gaps:108/456 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 PPDIPQLSSIYIPDSIKQQQQQQQQQQSRYLPAHQPGAKDMLKFVRKPDQEHPSPNASVTSSGTG 275
            ||.:...::....:.:.|...::..:.|:         :::.:.:|:.:.|.           .|
  Rat     4 PPAVAAAAAAAASEELSQVPDEELLRWSK---------EELARRLRRAEGEK-----------VG 48

  Fly   276 IPTANGGGRLTAEQNRQLQSLVNELRALKEQNQRLLDDNQELRDLCCFLDDDRQKGRKLAREWQR 340
            :...:||  |..:.||:||..:.|:|.||:.||||.|||||||:|||||||||||||||||||||
  Rat    49 LMLEHGG--LMRDVNRRLQQHLLEIRGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQR 111

  Fly   341 FGRYTASVMRQEVAAYQNKLRQLDDKQQELITDNLELKELCLYLDEERAHVAA--NALCAGCGAA 403
            |||:.|..:..|||..|.|||:|:.:|:.|:.:|||||||.|.||||||.:||  .|..:|.||.
  Rat   112 FGRHAAGAVWHEVARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAAAGGAGGSGGGAG 176

  Fly   404 TRNAL-------------------RDDGDGSSSST----------------------------NA 421
            :|:::                   ||.|||||:|:                            .|
  Rat   177 SRSSIDSQASLSGPLAGSAAGSGARDVGDGSSTSSAGSGGSPDHHHHVPPALLPPGPHKGPEGKA 241

  Fly   422 DETITALRNYA---EQRQLPQDLRHAHTLNDQTLQYVRSLERRIQQLEEERTTPTAHLQQPTTPT 483
            ..|..:|.:.:   ..|.:|      :.|:|.:..|:|.||.:::.|:.::.       .|..|.
  Rat   242 GATRRSLDDLSAPPHHRSIP------NGLHDPSSTYIRPLETKVKLLDGDKL-------PPQLPR 293

  Fly   484 PQATPTPTVTSAAT----PAKSAASPHQQQQQQQQHQQQQQDIVAAAAAAAAAIQLPEP------ 538
            |.......:..|.:    ..:...||:..:.|........|:::....|.... :||.|      
  Rat   294 PYGLQRSRLQQAGSGEFRTLRKGFSPYHSESQLASLPPSYQEVLQNGPACPVP-ELPSPPSTVYS 357

  Fly   539 IAG-RPEAVVRALQVLEVREQLERDRLGNLAGSALDQMDDGEKALVREMCNVVWRKLEGSPHGPA 602
            .|| :|||||.|::||||.|.|:|    .|..|..:.:.:.|||:||||||||||||     |.|
  Rat   358 SAGQKPEAVVHAMKVLEVHENLDR----QLQDSCEEDLSEKEKAIVREMCNVVWRKL-----GDA 413

  Fly   603 A 603
            |
  Rat   414 A 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccdc85NP_608734.2 CCDC85 283..419 CDD:463009 83/156 (53%)
Ccdc85cNP_001420170.1 CCDC85 16..220 CDD:463009 91/225 (40%)

Return to query results.
Submit another query.