DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ccdc85 and ccdc85al

DIOPT Version :10

Sequence 1:NP_608734.2 Gene:Ccdc85 / 33509 FlyBaseID:FBgn0031488 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001428974.1 Gene:ccdc85al / 447831 ZFINID:ZDB-GENE-040912-92 Length:443 Species:Danio rerio


Alignment Length:349 Identity:114/349 - (32%)
Similarity:168/349 - (48%) Gaps:67/349 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 PQPATGILKPHLPLKYPPDIPQLSSIYIPDSIKQQQQQQQQQQSRYLPAHQPGAKDMLKFVRKPD 259
            ||...|...|..|.:   ||..|:.    :.:.|..:::..|:.|...|      |.:..:    
Zfish     5 PQAQPGSKAPESPAE---DIANLTD----EELLQWSKEELVQRLRRCEA------DKMSVI---- 52

  Fly   260 QEHPSPNASVTSSGTGIPTANGGGRLTAEQNRQLQSLVNELRALKEQNQRLLDDNQELRDLCCFL 324
            .:|                    ..|..|.||.||..:||:|.|||.||:|.|||:|||||||||
Zfish    53 LDH--------------------SNLIREVNRSLQLHLNEIRGLKEVNQKLQDDNRELRDLCCFL 97

  Fly   325 DDDRQKGRKLAREWQRFGRYTASVMRQEVAAYQNKLRQLDDKQQELITDNLELKELCLYLDEERA 389
            |||||||::::|||||.||::|||||:|||.|..||.:|:.||:::|.:||||:||||.:||::.
Zfish    98 DDDRQKGKRVSREWQRLGRFSASVMRKEVALYLQKLTELERKQEDVIRENLELRELCLLIDEDKG 162

  Fly   390 HVAANALCAGCGA-ATRNA------------LRDDGDGSSSSTNADETITALRNYAEQRQLPQDL 441
            ......:.:|.|. ..||:            :||.|||||:|:......::...:.:|.|.|...
Zfish   163 GGGVEGVQSGTGTIGCRNSIDSQSGLLVPGLMRDVGDGSSTSSAGSADSSSEHPHHKQPQPPSST 227

  Fly   442 RHAHTLNDQTLQYVRSLER------RIQQLE---EERTTPTAH---LQQPTTPT--PQATPTPTV 492
            ...:...|  :|..|||:|      .|...:   ..|:|...:   |.||..|.  ..:.|...:
Zfish   228 GTGNKSPD--IQKSRSLKRGEGDHGEISSPDPPVRHRSTSLEYPFVLPQPCRPRCGSISVPDHRL 290

  Fly   493 TSAATPAKSAAS-PHQQQQQQQQH 515
            ....:|.|...| .|:..:...:|
Zfish   291 IRGLSPEKYGRSLGHRSPETHPKH 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccdc85NP_608734.2 CCDC85 283..419 CDD:463009 77/148 (52%)
ccdc85alNP_001428974.1 None

Return to query results.
Submit another query.