DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccdc85 and picc-1

DIOPT Version :10

Sequence 1:NP_608734.2 Gene:Ccdc85 / 33509 FlyBaseID:FBgn0031488 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_504560.1 Gene:picc-1 / 3564810 WormBaseID:WBGene00017931 Length:535 Species:Caenorhabditis elegans


Alignment Length:396 Identity:107/396 - (27%)
Similarity:171/396 - (43%) Gaps:104/396 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 QQQQQQSHQLQTVATIHQPHSTQQQALTSRLPIQQQSTKELPNLAGQQRRSFHYQLQNQQQSLRS 175
            ::....|....:.:|:|     ..:.:...:|:...:|..  ::......|..|....:|...||
 Worm     7 RRANMSSESGSSASTVH-----YAKPVLRHVPMPSSTTPS--SIGSSSSSSSSYASSTKQTPPRS 64

  Fly   176 PQLKAP----------APAHSIPPRYQPPPQPATGILKPHLPLKYPPDIPQLSSIYIPDSIKQQQ 230
            |.::.|          .|:.|:.|:..|                         |..:|.|..|.|
 Worm    65 PVIRYPTVVVSKNSIATPSSSLTPQGTP-------------------------SYAVPVSRNQMQ 104

  Fly   231 QQQQQQQSRYLPAHQPGAKDMLKFVRKPDQEHPSPNASVTSSGTGIPTANGGGRLTAEQNRQLQS 295
            ....:.|..::       :...|.:...:|:.....:.|.:                :.||::|.
 Worm   105 YSASKLQYEHM-------RHRCKMLDDENQKLMRMQSDVVN----------------DANRRVQM 146

  Fly   296 LVNELRALKEQNQRLLDDNQELRDLCCFLDDDRQKGRKLAREWQRFGRYTASVMRQEVAAYQNKL 360
            .|||:|.|||.|::|...|:|||||.|||||||||.||||||||:|||||:|:|:|||.:|..|:
 Worm   147 HVNEIRMLKEDNRKLAISNKELRDLSCFLDDDRQKTRKLAREWQKFGRYTSSLMKQEVDSYHQKM 211

  Fly   361 RQLDDK--QQELITDNLELKELCLYLDEER----AHVAANALC------AGCGAATRNALRDDGD 413
            ..:::|  .:|...|  ||::||:||||:|    ::.|||..|      .|||::.::       
 Worm   212 VSIEEKLCTKEREVD--ELRQLCMYLDEQRQSLMSNAAANVDCDNESEDLGCGSSEQS------- 267

  Fly   414 GSSSSTNADE------------------TITALRNYAEQRQLPQDLRHAHTLNDQTLQYVRSLER 460
            |.|...|.:|                  .|.|....:|..:..:....:.....:.|.|::|||.
 Worm   268 GGSEGHNDEEKHHEFNKCFNKHKESTLRRIMATSMCSEPSEEEERREVSKRERSRLLGYIQSLEN 332

  Fly   461 RIQQLE 466
            ||:.||
 Worm   333 RIKHLE 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccdc85NP_608734.2 CCDC85 283..419 CDD:463009 68/147 (46%)
picc-1NP_504560.1 CCDC85 113..275 CDD:463009 71/193 (37%)

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