DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and INO80

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_011365.1 Gene:INO80 / 852728 SGDID:S000003118 Length:1489 Species:Saccharomyces cerevisiae


Alignment Length:914 Identity:185/914 - (20%)
Similarity:317/914 - (34%) Gaps:366/914 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMA 117
            |..|.::..|.:|...|:...||..:..|::|    |::                          
Yeast   636 DFDNENDEQLRLRAAENASNALAETRAKAKQF----DDH-------------------------- 670

  Fly   118 CNALVLFHPPAYTEHERMGMDPTKVLVHVVVDP-LLSNILRPHQREGVRFMYECVEGKRGNFNGC 181
            .||    |.....|.|....:||.:....:..| :|:..|:.:|.:|:.::....:   ...|| 
Yeast   671 ANA----HEEEEEEDELNFQNPTSLGEITIEQPKILACTLKEYQLKGLNWLANLYD---QGING- 727

  Fly   182 IMADEMGLGKTLQCVTL---------VWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLH 237
            |:|||||||||:|.:::         :|     ||        .:||:|:|.:.||..|.:|:| 
Yeast   728 ILADEMGLGKTVQSISVLAHLAENHNIW-----GP--------FLVVTPASTLHNWVNEISKFL- 778

  Fly   238 GRLLCLPMEGGTKENTIRALEQF-SMTSARL--GTP--VLLISYETFRIYAEILCKYEVGMVICD 297
            .:...||..|..  |..:.|.:| ...:.|.  ..|  |::.||:.....|..|.|.:...:|.|
Yeast   779 PQFKILPYWGNA--NDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILD 841

  Fly   298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAI 362
            |...:|:|.:..::.|:....:.|:||:||||||.:.|.::|::|:.|.:..:...|...|...|
Yeast   842 EAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDI 906

  Fly   363 --LRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELY 425
              ....||...:|:.:|       |..::...::||..:.:...|..|.|:.:...||..|.:||
Yeast   907 ESHAEANTKLNQQQLRR-------LHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLY 964

  Fly   426 --------TNF------LKSDQVRRSLADCNEKASLTALADITTLKKICSHPD------------ 464
                    ||:      ..:|....|.::.....:|  :..:...:|:|:|||            
Yeast   965 QVLKSQISTNYDAIENAATNDSTSNSASNSGSDQNL--INAVMQFRKVCNHPDLFERADVDSPFS 1027

  Fly   465 ------------------------------------------------------------LIYE- 468
                                                                        |||| 
Yeast  1028 FTTFGKTTSMLTASVANNNSSVISNSNMNLSSMSSNNISNGKFTDLIYSSRNPIKYSLPRLIYED 1092

  Fly   469 -------------------------------------KLTA---------------------REK 475
                                                 |||.                     |..
Yeast  1093 LILPNYNNDVDIANKLKNVKFNIFNPSTNYELCLFLSKLTGEPSLNEFFRVSTTPLLKRVIERTN 1157

  Fly   476 GFENSQN---------------------------------------------------------- 482
            |.:|:.:                                                          
Yeast  1158 GPKNTDSLSFKTITQELLEVTRNAPSEGVMASLLNVEKHAYEREYLNCIQRGYHPNVSAPPVTIE 1222

  Fly   483 VLPSNYKPKDLNPEL-------------------------------------------------- 497
            ||.|::....:|.||                                                  
Yeast  1223 VLGSSHVTNSINNELFDPLISQALSDIPAITQYNMHVKKGIPVEDFPKTGLFPEPLNKNFSSNIS 1287

  Fly   498 ----------SGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSI 552
                      |.|...||.:|..:::||: :|::....|:.:||.|:....|:|..:||||:..:
Yeast  1288 MPSMDRFITESAKLRKLDELLVKLKSEGH-RVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKL 1351

  Fly   553 KKRSKVV-DRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQK 616
            :.|..:| |...:||  .|:|:||::|||.|:||..|:.:..:|.||||..|.|||.|..|.||.
Yeast  1352 EDRRDLVHDWQTNPE--IFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQT 1414

  Fly   617 KPCYIYRLVASGSIEEK--------------ILQRQTHKKSLSSTIIDNNES-----AEKHFTRD 662
            :...:|||:..|:|||:              :::.:|.:|::.:..:..|:|     ..|..::|
Yeast  1415 RQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTIEVGENDSEVTREGSKSISQD 1479

  Fly   663 DLKD 666
            .:|:
Yeast  1480 GIKE 1483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 5/49 (10%)
HepA <156..650 CDD:440319 161/787 (20%)
DEXHc_RAD54A 156..396 CDD:350825 69/255 (27%)
INO80NP_011365.1 DBINO 469..602 CDD:464024
PLN03142 537..>1026 CDD:215601 108/452 (24%)
DEXQc_INO80 706..935 CDD:350760 69/255 (27%)
SF2_C_SNF 1295..1423 CDD:350180 49/130 (38%)
Blue background indicates that the domain is not in the aligned region.

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