DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and AT3G20010

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_188635.1 Gene:AT3G20010 / 821539 AraportID:AT3G20010 Length:1047 Species:Arabidopsis thaliana


Alignment Length:1004 Identity:194/1004 - (19%)
Similarity:329/1004 - (32%) Gaps:395/1004 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRRSLAPSQRGPLRPESRHSFTPPLLKKNKRSCQQELEREQELDRRRL-GALRDASNTSELPLPI 64
            ::|:|.||...|  |....|.|..:  .|....:..::.|:.|.::.| ..|..:.|..  |||.
plant   101 LKRTLPPSFNSP--PLPARSGTNNI--SNASGSRVGVDYERPLSQQALKRTLPPSFNPP--PLPS 159

  Fly    65 RFTAN-----------SEYELAIAKVLARKFKVPMDNYVPDYGGKRV-LGVRRCISRRPLHDPM- 116
            |...|           ::|.......:..|     ..:...|.|... :|::|.::...:..|. 
plant   160 RSGTNNIRNAGGSRFGADYSHPAVSAVGNK-----STFGDHYSGAHAEIGIQRGVNGVRILPPSL 219

  Fly   117 --ACNALVLFHPPAYTEHERMG------MDPTKVLVH-----VVVDPLLSNILRP---------H 159
              ..:|.||.|..:.....|.|      .|..:.||:     |:..|:..:.|.|         |
plant   220 THGTSASVLHHAGSSDPMHRFGGGEDRNPDNDERLVYQAALQVLNQPMTESDLPPGTLSVPLMRH 284

  Fly   160 QREGVRFMYECVEGKRGNFN--GCIMADEMGLGKTLQCVTLVWTLLRQ----------------- 205
            |:..:.:|:   :.:..:||  |.|:||:.|||||:..:.|:   |:|                 
plant   285 QKIALAWMF---QKETSSFNCPGGILADDQGLGKTVSTIALI---LKQKIVSQLKSESSCKQETE 343

  Fly   206 ---------------------GPECKPTINK---------------------------------- 215
                                 .||.|.:.|.                                  
plant   344 ALVLDADDESDNAKHESGSHVKPELKVSSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQ 408

  Fly   216 -------AIVVSPSSLVKNWEKEFTKWL--HGRLLCLPMEGGTK--------------------- 250
                   .::|.|:|:|:.|.:|..:.:  ..:|..|...|..:                     
plant   409 WKRPAAGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVT 473

  Fly   251 ------------ENTIRALEQFSMTS---------------------ARLGT----------PVL 272
                        ||..:..:::.:.|                     .|..|          |:.
plant   474 NEAPNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSEPDCGPLG 538

  Fly   273 LISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYY 337
            .:.:  |||             :.||...:||......::...|:.|||..||||||||.:.:.|
plant   539 KVGW--FRI-------------VLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLY 588

  Fly   338 SLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILT 402
            |...|:..:   ..||:| :|.|.|....:.:|.:     ..:|.|.::..:   ::|||...|.
plant   589 SYFRFLRYD---PYAVYK-SFYSTIKVPISRNSCQ-----GYKKLQAVLRAI---MLRRTKGTLL 641

  Fly   403 KYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLA--------DCNEKASLTALADITT---- 455
            ...|:              :.|....:...||..|:|        :.:.::...|.||..|    
plant   642 DGKPI--------------INLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQN 692

  Fly   456 ----------LKKICSHPDLI--------------------------------------YEKLTA 472
                      |::.|.||.|:                                      ||....
plant   693 YANILLLLLRLRQACDHPQLVKRYNSDPVGKVSEAAVRRLPREARSRLINRLESSSAICYECNEP 757

  Fly   473 REK--------------------GFEN-----------SQNVLPSNYKPKDLNPELSG------- 499
            .||                    |.||           :::|:.|....::...:.||       
plant   758 PEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQQLARDVVFSESSLRNCTSDDSGCSSSHDN 822

  Fly   500 -----KFMLLDFMLAAIRA---------------------------------------------- 513
                 .|...||..:.|:|                                              
plant   823 GLDRSVFQKRDFCSSKIKAVLDILQSLSQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSS 887

  Fly   514 --EGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSS 576
              :|..|.::.|.:|..|||.|....:....|.|||||||:..|.:.|..|: .:.|..:.::|.
plant   888 PSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFS-KKPDVKVMLMSL 951

  Fly   577 KAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHK 641
            |||..|||::.|..:.:.|..|||..::||:.|..|.||.:|..:.|:....::|::||:.|..|
plant   952 KAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQEEK 1016

  Fly   642 KSLSSTII--DNNESAEKHFTRDDLKDLF 668
            :::.::..  ::..|:....|.||||.||
plant  1017 RTMVASAFGEEHGGSSATRLTVDDLKYLF 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 9/53 (17%)
HepA <156..650 CDD:440319 149/802 (19%)
DEXHc_RAD54A 156..396 CDD:350825 69/395 (17%)
AT3G20010NP_188635.1 HepA <273..1025 CDD:440319 148/799 (19%)
RING-HC_CHR27-like 749..800 CDD:438504 7/50 (14%)

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