DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and RAD54

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_188552.3 Gene:RAD54 / 821455 AraportID:AT3G19210 Length:910 Species:Arabidopsis thaliana


Alignment Length:852 Identity:332/852 - (38%)
Similarity:461/852 - (54%) Gaps:154/852 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QRGPLRPE----------SRHSFTPPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSELP-- 61
            ||.||.|.          .|..|.||        |....:...:|.||.....|.....|..|  
plant    67 QRQPLLPRVLSVSDGAAVCRKPFKPP--------CSHGYDSTGQLSRRLSARKRFVPWGSSTPVV 123

  Fly    62 --LPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMAC-----N 119
              ||.:..|::..|                                    |...:.:.|     .
plant   124 VALPTKLEASTNIE------------------------------------RDEEEEVVCLPPDIE 152

  Fly   120 ALVLFHPPAYTEHERMGM-DPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRG--NFNGC 181
            .|||:      :.|..|| :.|.::||.|    |...|||||||||:||::||.|..|  |.|||
plant   153 PLVLW------QSEEDGMSNVTTIMVHSV----LVKFLRPHQREGVQFMFDCVSGLHGSANINGC 207

  Fly   182 IMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPME 246
            |:||:||||||||.:||::|||.||.:..|.:.|||:|:|:|||.|||.|..||:..|:..:.:.
plant   208 ILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALC 272

  Fly   247 GGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYE-VGMVICDEGHRLKNSDNLTY 310
            ..|:::.:..::.|  |..|....||:|||||||:::...|:.| ..::||||.|||||...||.
plant   273 ESTRDDVLSGIDSF--TRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTN 335

  Fly   311 QALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQER 375
            :||..|..||||||||||:||||.|::::|||.||..||.||.|:..:|:.|:.|:...:||:|:
plant   336 RALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEK 400

  Fly   376 QRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLAD 440
            ..|.:::.||...|:|.|:||||.:|:.:||.|...|:|.|:|.:|..||.:|:.|..::|:|||
plant   401 NLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALAD 465

  Fly   441 CNEKASLTALADITTLKKICSHPDLIYEKLTAREK---GFENSQNVLPSNYKPKDLNP------- 495
             |.|.: ..||.||.|||:|:||.|||:.:.:...   ||||.....|:.........       
plant   466 -NAKQT-KVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGA 528

  Fly   496 --ELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKV 558
              |||||..:|..:||.:|.:.:|::||:||||||||||.||.|:|:|.|:||||:.:|.||.|:
plant   529 WVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKL 593

  Fly   559 VDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYR 623
            |:|.|||..|.|.|:||||||||||||||||||.:||||||||||:||.||||||||||..|:||
plant   594 VNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYR 658

  Fly   624 LVASGSIEEKILQRQTHKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKC 684
            .:::|:||||:.|||..|:.|...|    .||:.......:.:||:|||:|..::.|:.|:|:.|
plant   659 FLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSC 723

  Fly   685 KRC------VQNIQ-----------MKPPPED----------------------TDCTSHLSQWY 710
            .||      .:||:           .:...||                      |.....|..|.
plant   724 SRCQNDASGTENIEEGNENNVDDNACQIDQEDIGGFAKDAGCFNLLKNSERQVGTPLEEDLGSWG 788

  Fly   711 HCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVP----------SAEEEATDQPE-----E 760
            |...::.:||.||..:..|  .|:|||.::... ::||          .:||...:||.     .
plant   789 HHFTSKSVPDAILQASAGD--EVTFVFTNQVDG-KLVPIESNVSPKTVESEEHNRNQPVNKRAFN 850

  Fly   761 KPESRKR 767
            ||:.|.|
plant   851 KPQQRPR 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 5/54 (9%)
HepA <156..650 CDD:440319 258/512 (50%)
DEXHc_RAD54A 156..396 CDD:350825 119/242 (49%)
RAD54NP_188552.3 HepA <180..679 CDD:440319 256/502 (51%)
DEXHc_RAD54 180..421 CDD:350762 119/242 (49%)

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