DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and Ttf2

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_036019252.1 Gene:Ttf2 / 74044 MGIID:1921294 Length:1155 Species:Mus musculus


Alignment Length:640 Identity:161/640 - (25%)
Similarity:267/640 - (41%) Gaps:150/640 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 DPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTL 202
            ||..:.|     |||.     ||::.:.::......|.   .|.|:||:|||||||..:.|:.|.
Mouse   555 DPAGLKV-----PLLL-----HQKQALAWLLWRESQKP---QGGILADDMGLGKTLTMIALILTK 606

  Fly   203 LRQ-----GPECKP------------TINKAIVVSPSSLVKNWEKEFTKWL-HGRLLCLPMEGGT 249
            ..|     ....:|            |.:..::|.|:||:.:|:.|..|.: ..||......|..
Mouse   607 KNQQKSKEKERSEPVTWLSKNDSSVFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYLYHGPN 671

  Fly   250 KENTIRALEQFSMTSARLGTPVLLISYE--TFRIYAEI-------------LCKYEVGMVICDEG 299
            :....:.|..:.:..    |...|::.|  |.:...|:             |.:.....:|.||.
Mouse   672 RSRHAKVLSTYDIVI----TTYSLLAKEIPTTKQEGEVPGANLSVEGTSAPLLQVVWARIILDEA 732

  Fly   300 HRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILR 364
            |.:||....|..|:..|:.:.|..::||||||:|.:.|||:.|:........:::|...::..::
Mouse   733 HNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPFDEFSLWKSQVDNGSMK 797

  Fly   365 GQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTK------YLPVK--------------- 408
            |       .||...:.|:         .::|||...|..      .||.:               
Mouse   798 G-------GERLSILTKS---------LLLRRTKDQLDSTGKPLVALPARRCQLHRLKLSEDERA 846

  Fly   409 -FEMVICAKLTAIQLELYTNFLKSDQVRRS--------------------------LADCNEKAS 446
             :::.:....:|:|     ::||..:.|.|                          .||....::
Mouse   847 VYDIFLARSRSALQ-----SYLKRQEGRGSHHGRSPDNPFSRVAQEFGSSVSQGCPAADSQRPST 906

  Fly   447 LTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLP----------SNYKPKDLNP--ELSG 499
            :..|:.:..|::.|.|..|:...|...|  .|:...||.          |.....:.:|  .|:|
Mouse   907 VHVLSQLLRLRQCCCHLSLLKSALDPTE--LESEGLVLSLEEQLSALTLSKVDVSEPSPTVSLNG 969

  Fly   500 ---KFMLLD---------FMLAAIRA----EGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDG 548
               |..|.|         .:||.:.|    .|:.|.|::|.:|..|.:.....:|.:..:..:||
Mouse   970 TCFKAELFDDTRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKKNRLTYATIDG 1034

  Fly   549 TMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRD 613
            :::.|:|..:|:.||..:... :.::|..|||.||||.|.|.||:.|..|||:.::||..|::|.
Mouse  1035 SVNPKQRMDLVEAFNHSQGPQ-VMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRV 1098

  Fly   614 GQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLF 668
            ||||...|:|.|..|::||||||.|..||.|:..::..:|......|..|||.||
Mouse  1099 GQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSEGPVTKLTLADLKILF 1153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137
HepA <156..650 CDD:440319 148/602 (25%)
DEXHc_RAD54A 156..396 CDD:350825 62/272 (23%)
Ttf2XP_036019252.1 zf-GRF 4..44 CDD:480736
HepA <550..1135 CDD:440319 154/620 (25%)
DEXHc_TTF2 563..813 CDD:350830 64/277 (23%)
Blue background indicates that the domain is not in the aligned region.

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