Protein Alignment okr and Chd5

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: XP_017449128.1
• Gene: Chd5 / 691589
• RGDID: 1582725
• Length: 2000
• Species: Rattus norvegicus
• Alignment Length: 648
• Identity: 195/648 - (30%)
• Similarity: 303/648 - (46%)
• Gaps: 84/648 - (12%)

  Fly   147 VVDPLL------------SNILRPHQREGVRFM-YECVEGKRGNFNGCIMADEMGLGKTLQCVTL 198
            :|||.:            ...|.|:|.||:.:: :...:|     ...|:|||||||||:|.:..
  Rat   677 IVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQG-----TDTILADEMGLGKTVQTIVF 736

  Fly   199 VWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWL------------HGRLLCLPMEGGTKE 251
            :::|.::|....|    .:|.:|.|.:.|||:||..|.            ..|.:....|...::
  Rat   737 LYSLYKEGHSKGP----YLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFED 797

  Fly   252 NTIRALEQ-FSM-TSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALM 314
            |.||..:: |.| ...::...|||.|||...|...||...|...::.||.|||||:.:..::.|.
  Rat   798 NAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 862

  Fly   315 GLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAI 379
            ..|...::||:|||:||:|.|.:.|:||:.||.......|...|         .|.:::::   |
  Rat   863 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF---------ADISKEDQ---I 915

  Fly   380 EKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFL-KSDQVRRSLADCNE 443
            :|..:|:|   ..::||....:.|.:|.|.|:::..:|:.:|.:.|...| ::.:...|....|:
  Rat   916 KKLHDLLG---PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQ 977

  Fly   444 KASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPS-NYKPKDLNPELSGKFMLLDFM 507
            .:.|..:.|   |||.|:||.|.  .:.|.|      ..:||: :|....| .:.|||.|||..|
  Rat   978 VSLLNIMMD---LKKCCNHPYLF--PVAAVE------APMLPNGSYDGSSL-VKSSGKLMLLQKM 1030

  Fly   508 LAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLF 572
            |..:|.||: :|::.|..|:.|||.|.......|.:.|:||.::...|.:.:||||.|.:..|.|
  Rat  1031 LKKLRDEGH-RVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCF 1094

  Fly   573 MLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQR 637
            :||::|||.|:||..|:.:.::|.||||.||.||.:|..|.||.|...|||.|...|:||:|.|.
  Rat  1095 LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQV 1159

  Fly   638 QTHKKSLSSTII-DNNESAEKHFTRDDLKDLFTFDANIL--SDTHDKLKCKRCVQNIQMKPPPED 699
            ...|..|:..:: ....|.....|:.:|.|:..|....|  .|....:.     |..:...|..|
  Rat  1160 AKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMS-----QGQRPTTPIPD 1219

  Fly   700 TDCTSHLSQWYHCSNNR-GLPDNILAQAWMDCKCV--SFVFHHRSQAQEIVPSAEEEATDQPE 759
            ...|...|......... |.|..       |.|.|  |.|.|:...|...:....::|||..|
  Rat  1220 VQSTKGGSLAAGAKKKHGGTPPG-------DNKDVEDSSVIHYDDAAISKLLDRNQDATDDTE 1275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137
		HepA	<156..650	CDD:440319	167/511 (33%)
		DEXHc_RAD54A	156..396	CDD:350825	76/254 (30%)
Chd5	XP_017449128.1	CHDNT	144..199	CDD:462357
		PHD1_CHD_II	343..385	CDD:277006
		PHD2_CHD_II	416..458	CDD:277007
		CD1_tandem_CHD3-4_like	463..542	CDD:349314
		CD2_tandem_CHD3-4_like	587..640	CDD:349309
		PLN03142	696..>1214	CDD:215601	175/559 (31%)
		DUF1087	1296..1349	CDD:461922
		CHDII_SANT-like	1390..1530	CDD:461920
		LGT	<1533..1684	CDD:469786
		CHDCT2	1731..1876	CDD:462358