Protein Alignment okr and chd1

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: XP_009303375.1
• Gene: chd1 / 563236
• ZFINID: ZDB-GENE-030131-7120
• Length: 1778
• Species: Danio rerio
• Alignment Length: 795
• Identity: 213/795 - (26%)
• Similarity: 344/795 - (43%)
• Gaps: 162/795 - (20%)

  Fly    32 SCQQE----LEREQELDRRRLGALRDASNTSELP--------LPIRFTANSEYELAIAKVLARKF 84
            :||||    |..:.:|..|.:|.....| .:..|        ||.     ||.......::::||
Zfish   363 NCQQELMDDLHSQYQLVERIIGHSNQKS-AAGYPDYLCKWQGLPY-----SECSWEDGALISKKF 421

  Fly    85 KVPMDNYVPDYGGKRVLGVRRC--ISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVV 147
            :..:|.|:.....|.:.. |.|  :.:||...||.       ..|.|...|  |::
Zfish   422 QKCIDEYMSRNQCKTIPS-RDCKVLKQRPRFVPMK-------KQPHYIGGE--GLE--------- 467

  Fly   148 VDPLLSNILRPHQREGVRFM-YECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQ----GP 207
                    ||.:|.:|:.:| :...:|     |.||:|||||||||:|.::.:..|..:    ||
Zfish   468 --------LRDYQLDGLNWMAHSWCKG-----NSCILADEMGLGKTIQTISFLNYLFHEHQLYGP 519

  Fly   208 ECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVL 272
                    .::|.|.|.:.:|::|...|.....:.:.:......|.||..|.....:.||...:|
Zfish   520 --------FLLVVPLSTLTSWQREIQLWAPLMNVVVYLGDINSRNMIRTHEWMHPQTKRLKLNIL 576

  Fly   273 LISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYY 337
            |.:||........|.......:..||.|||||.|:|.|:.::..|:..|:|::|||:||.|.|.:
Zfish   577 LTTYEILLKDKSFLGNVSWAFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELW 641

  Fly   338 SLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILT 402
            ||::|:.||...:..:|:..      .|:..||......:.:|          ..::||..:.:.
Zfish   642 SLLHFIMPEKFHSWEMFEEE------HGKGRDSGYTSLHKELE----------PFLLRRVKKDVE 690

  Fly   403 KYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSH----- 462
            |.||.|.|.::..:::|:|.:.|...|..:.  ::|:...:.::...|..:..|||.|:|
Zfish   691 KSLPAKVEQILRVEMSAVQKQYYKWILTRNY--KALSKGTKGSTSGFLNIMMELKKCCNHCYLIK 753

  Fly   463 -PDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYT 526
             ||         :..|.|.|..|....:.       |||.:|||.:|..::..|: :|::.|...
Zfish   754 PPD---------DNEFYNRQEGLQHLVRS-------SGKLILLDKLLVRLKERGH-RVLIFSQMV 801

  Fly   527 QTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRL 591
            :.||:..:..:.|::.|.||||::..:.|.:.:|.||...|:.|.|:||::|||.|:||..|:.:
Zfish   802 RMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTV 866

  Fly   592 FMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAE 656
            .:||.||||.||.||.||..|.||||...|||||..||:||:|::|...|..|...:|...::..
Zfish   867 VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTG 931

  Fly   657 K---H----------FTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPP------PEDTDC 702
            |   |          |.:::|..:..|.|..|                 .|.|      |::.|.
Zfish   932 KTVLHTGAAPSSSTPFNKEELSAILKFGAEEL-----------------FKEPEGEEQEPQEMDI 979

  Fly   703 TSHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKPESRKR 767
            ...|.:.....|:.| |..:..:.....|..:|            ...|:|..|...|:.:..
Zfish   980 DEILKRAETRENDPG-PSTVGEELLSQFKVANF------------SMMEDEEIDMDTERNDRN-- 1029

  Fly   768 SSTPASDDSADEDFR 782
                 .||...||.|
Zfish  1030 -----WDDIIPEDHR 1039

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	11/51 (22%)
		HepA	<156..650	CDD:440319	157/504 (31%)
		DEXHc_RAD54A	156..396	CDD:350825	69/244 (28%)
chd1	XP_009303375.1	CD1_tandem_CHD1-2_like	258..340	CDD:349313
		CD2_tandem_CHD1-2_like	375..431	CDD:349308	13/61 (21%)
		PLN03142	457..>987	CDD:215601	174/613 (28%)
		CDH1_2_SANT_HL1	1112..1199	CDD:477096
		DUF4208	1481..1571	CDD:464035
		U2AF_lg	1661..>1751	CDD:273727