DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and zranb3

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_017208927.2 Gene:zranb3 / 553237 ZFINID:ZDB-GENE-060712-1 Length:1079 Species:Danio rerio


Alignment Length:799 Identity:167/799 - (20%)
Similarity:291/799 - (36%) Gaps:238/799 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 GMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNG-CIMADEMGLGKTLQCVTLV 199
            |.|..::|...:.:.|:     |.|||||.|..        :.|| |::|||||||||:|.:::.
Zfish    21 GKDALQLLPQKLREKLM-----PFQREGVCFAL--------SRNGRCMIADEMGLGKTIQAISVA 72

  Fly   200 WTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTS 264
            :...::.|        .::|.||||...|.:|..||:          .......|..:|..:.|.
Zfish    73 YIFKQEWP--------LLIVVPSSLKYPWIEELEKWI----------PELDPRDINLVESKTDTM 119

  Fly   265 ARLGTPVLLISYETF----RIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGL--KTKRRVL 323
            :...:.|.::.|...    |...|.|.|.:..:|:.||.|.||:.:....:.|:.:  ..||.:|
Zfish   120 SISTSKVTILGYGLLTTDARALLEALNKQQFAVVLVDESHYLKSRNAARSKILVPIIQSAKRAIL 184

  Fly   324 LSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGL 388
            |:|||......|.:..::.:.|...||.:.:...:.:|..|  ...:..|...|......||...
Zfish   185 LTGTPALGRPEELFMQIDALYPRRFGTWSDYANKYCNAHYR--YFGARRQWDCRGASHLDELHKR 247

  Fly   389 VDQCIIRR-TNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALAD 452
            :.:.:||| .||:||: ||.|..                        :|...|..:.|:..|.|.
Zfish   248 LSEIMIRRLKNQVLTQ-LPPKIR------------------------QRIPFDLPKDAAKEASAS 287

  Fly   453 ITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGND 517
            ....:|:.|         :..|..|....:::...||    ...::....:.|::...:.:| ..
Zfish   288 FEQWEKLMS---------SESENQFVEVMSLITHMYK----QTAVAKAGAVKDYIKMMLESE-QL 338

  Fly   518 KVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRF-NDPESDSFLFMLSSKAGGC 581
            |.::.:::...|....:...:.|.|::|:||::...:|.::|.|| |||  |:.:.:||.:|.|.
Zfish   339 KFLVFAHHLSMLQACTEAVIEAKAGYIRIDGSVPSAERIQLVHRFQNDP--DTRVAVLSIQAAGQ 401

  Fly   582 GLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSS 646
            ||....|:.:...:..|||.:.:||..|..|.||....:|:.|:|.|:.:..:......|::::.
Zfish   402 GLTFTAASHVVFAELYWNPGHIKQAEDRAHRIGQTATVHIHYLIAKGTFDTVMWAMLNRKETVTG 466

  Fly   647 TIIDNNE---SAEK-----------------------------------HFTRDDLKDLFTFDAN 673
            :.::..:   .||:                                   ||.||...|:.:|   
Zfish   467 SALNGKKEYLKAEEGDQEKWDFLNFAQAWTPNQMLKGDSEDDKDGVFFSHFERDKQHDIRSF--- 528

  Fly   674 ILSDTHDKLKCKRCVQNIQ---------------MKPPPEDTDCTS------------------- 704
            .....|.:.|.||...:..               ..|..:..|.|:                   
Zfish   529 FSPSVHKEKKRKRTEDSTSDGSPLPQLPAGAEPTQTPETQSFDLTADQGEDFSPQVKRFRQVSPL 593

  Fly   705 ---------------------------HLSQWYHCS----NNRGL---------PDNI------- 722
                                       |..:| :||    :|.||         |.|:       
Zfish   594 SRRGGKKSPLSPLFAPRRLSAGLQAPRHNQKW-NCSSCTFSNSGLLLRCEMCDSPRNVQKALSPP 657

  Fly   723 ------LAQAWMDCKCVS-------------FVFHHRSQAQEIVPSAEEEATDQPEEKPESRKRS 768
                  .:.:.:...|:|             ....|:...|:..|:..|...|..||      :.
Zfish   658 SSLADPSSSSSLTTICISDSDTENEPSTSSKIQTPHKHPNQQASPNVAETHKDISEE------QG 716

  Fly   769 STP-------ASDDSADED 780
            |||       |:||.|.|:
Zfish   717 STPKTFNGDSANDDGAYEE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137
HepA <156..650 CDD:440319 122/502 (24%)
DEXHc_RAD54A 156..396 CDD:350825 64/246 (26%)
zranb3XP_017208927.2 None
Blue background indicates that the domain is not in the aligned region.

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