DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and ATRX

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_000480.3 Gene:ATRX / 546 HGNCID:886 Length:2492 Species:Homo sapiens


Alignment Length:963 Identity:256/963 - (26%)
Similarity:404/963 - (41%) Gaps:283/963 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RPESRHSFTPPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIRFTANSEYE----- 73
            ||.:| |.....|::|:||.:|:.:      |||:....|:|:.::        :|||.|     
Human  1401 RPRTR-SAKKAELEENQRSYKQKKK------RRRIKVQEDSSSENK--------SNSEEEEEEKE 1450

  Fly    74 ---------------------------LAIAKVLA-RKFKVPMDNYVPDYGGKRVLGVRRCISRR 110
                                       ..|.|:|. .|.:....|.:.:...:|.....|...|.
Human  1451 EEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERERERE 1515

  Fly   111 PLHDPMACNALVLFHPPAYTEHERMGMDPTK--VLVHVVVD-------PLLS---NI---LRPHQ 160
            .|.:.:                |.....|||  :...:|:|       ||:.   |:   |:|||
Human  1516 KLREVI----------------EIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQ 1564

  Fly   161 REGVRFMYECV-----EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPEC-KPTINKAIVV 219
            .:||:||::|.     :.|:...:|||:|..||||||||.|:.:.|:|.    | |...:.|:||
Human  1565 VDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLL----CDKLDFSTALVV 1625

  Fly   220 SPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKEN---------TIRALEQFSMTSARLGTP--VLL 273
            .|.:...||..||.||          :.|.|::         |::..::.|....|....  |::
Human  1626 CPLNTALNWMNEFEKW----------QEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMI 1680

  Fly   274 ISYETFRIYA-----------EILCKYEV----GMVICDEGHRLKNSDNLTYQALMGLKTKRRVL 323
            |.||.:|..|           ||..|..|    ..|:|||||.|||..:...:|:..::::||::
Human  1681 IGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRII 1745

  Fly   324 LSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGL 388
            |:|||:||:|.||:.:|||:...:||:...|:..|.:.|..||..|||..:.:...::...|..:
Human  1746 LTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEM 1810

  Fly   389 VDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKS-DQVRRSLADCNEKASLTALAD 452
            :..|:.|:....|||:||.|.|.|:..::|:||.:||..:|.. ..|..:......||......|
Human  1811 LAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQD 1875

  Fly   453 ITTLKKICSHP-DLIYEKLTAREKGF---------------ENSQNVLPSNYKPK---------- 491
            ...|.:|.:|| .|..:.::...||:               |.|.::...:|..|          
Human  1876 FQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKKGKKGKKD 1940

  Fly   492 --------------------------------------------------DLNP----------- 495
                                                              ..||           
Human  1941 SSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPSVSLKLEESKATSSSNPSSPAPDWYKDF 2005

  Fly   496 ---------ELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFE---QLARK---------- 538
                     |.|||.:|| |.:..:..|..|||::.|....:|||.|   :||.:          
Human  2006 VTDADAEVLEHSGKMVLL-FEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPL 2069

  Fly   539 ---------RKYGFVRLDGTMSIKKRSKVVDRFNDPES-DSFLFMLSSKAGGCGLNLIGANRLFM 593
                     |...:.||||:.:.:.|.|..:.|||..: ...||::|:|||..|:||:.|||:.:
Human  2070 IYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVII 2134

  Fly   594 FDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKH 658
            ||..|||:.|.|::.||:|.||.||.|:||.:|.|::|:||..||..|:|||..::| .:..|:|
Human  2135 FDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD-QQQVERH 2198

  Fly   659 FTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLP-DNI 722
            ||.::|.:|:||:.::|.|.:.:.|.||            ||..               || |.|
Human  2199 FTMNELTELYTFEPDLLDDPNSEKKKKR------------DTPM---------------LPKDTI 2236

  Fly   723 LAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKP-----ESRKRSST 770
            ||:. :.......|.:|  :...::...|||...:.|.|.     |:.|:..|
Human  2237 LAEL-LQIHKEHIVGYH--EHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLT 2286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 9/50 (18%)
HepA <156..650 CDD:440319 188/645 (29%)
DEXHc_RAD54A 156..396 CDD:350825 88/271 (32%)
ATRXNP_000480.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..147
ADDz_ATRX 167..270 CDD:277252
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..516
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 535..576
PxVxL motif 581..594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 593..616
PTZ00108 <642..857 CDD:240271
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..956
PTZ00121 <791..1438 CDD:173412 14/43 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 968..1479 18/92 (20%)
Interaction with DAXX 1189..1326
HepA <1543..2191 CDD:440319 191/662 (29%)
DEXHc_ATRX 1560..1803 CDD:350826 86/256 (34%)
DEGH box 1719..1722 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1913..2000 6/86 (7%)
Interaction with MECP2. /evidence=ECO:0000269|PubMed:17296936 2010..2280 97/301 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2462..2492
Blue background indicates that the domain is not in the aligned region.

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